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Genetic and clinical determinants of abdominal aortic diameter: genome-wide association studies, exome array data and Mendelian randomization study
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ddac051.pdf | Published version | 976.81 kB | Adobe PDF | View/Open | |
3._Supplementary_information.for.resubmission2ndRev.docx | Supporting information | 756.3 kB | Microsoft Word | View/Open | |
4._Supplementary_tables_S1_S14.xls | Supporting information | 5.24 MB | Microsoft Excel | View/Open | |
Title: | Genetic and clinical determinants of abdominal aortic diameter: genome-wide association studies, exome array data and Mendelian randomization study |
Authors: | Portilla-Fernandez, E Klarin, D Hwang, S-J Biggs, ML Bis, JC Weiss, S Rospleszcz, S Natarajan, P Hoffmann, U Rogers, IS Truong, QA Völker, U Dörr, M Bülow, R Criqui, MH Allison, M Ganesh, SK Yao, J Waldenberger, M Bamberg, F Rice, KM Essers, J Kapteijn, DMC Van der Laan, SW De Knegt, RJ Ghanbari, M Felix, JF Ikram, MA Kavousi, M Uitterlinden, AG Roks, AJM Danser, AHJ Tsao, PS Damrauer, SM Guo, X Rotter, JI Psaty, BM Kathiresan, S Völzke, H Peters, A Johnson, C Strauch, K Meitinger, T O'Donnell, CJ Dehghan, A VA Million Veteran Program |
Item Type: | Journal Article |
Abstract: | Progressive dilation of the infrarenal aortic diameter is a consequence of the ageing process and is considered the main determinant of Abdominal Aortic Aneurysm (AAA). We aimed to investigate the genetic and clinical determinants of abdominal aortic diameter (AAD). We conducted a meta-analysis of genome-wide association studies in ten cohorts (n = 13 542) imputed to the 1000 Genome Project reference panel including 12 815 subjects in the discovery phase and 727 subjects (PBIO) as replication. Maximum anterior-posterior diameter of the infrarenal aorta was used as AAD. We also included exome array data (n = 14 480) from seven epidemiologic studies. Single-variant and gene-based associations were done using SeqMeta package. A Mendelian randomization analysis was applied to investigate the causal effect of a number of clinical risk factors on AAD. In GWAS on AAD, rs74448815 in the intronic region of LDLRAD4 reached genome-wide significance (beta = -0.02, SE = 0.004, p-value = 2.10 × 10-8). The association replicated in the PBIO1 cohort (p-value = 8.19 × 10-4). In exome-array single-variant analysis (p-value threshold = 9 × 10-7), the lowest p-value was found for rs239259 located in SLC22A20 (beta = 0.007, p-value =1.2 × 10-5). In the gene-based analysis (p-value threshold = 1.85 × 10-6), PCSK5 showed an association with AAD (p-value = 8.03 × 10-7). Furthermore, in Mendelian randomization analyses, we found evidence for genetic association of pulse pressure (beta = -0.003, p-value = 0.02), triglycerides (beta = -0.16, p-value = 0.008) and height (beta = 0.03, p-value<0.0001), known risk factors for AAA, consistent with a causal association with AAD. Our findings point to new biology as well as highlighting gene regions in mechanisms that have previously been implicated in the genetics of other vascular diseases. |
Issue Date: | 15-Oct-2022 |
Date of Acceptance: | 11-Nov-2021 |
URI: | http://hdl.handle.net/10044/1/96289 |
DOI: | 10.1093/hmg/ddac051 |
ISSN: | 0964-6906 |
Publisher: | Oxford University Press |
Start Page: | 3566 |
End Page: | 3579 |
Journal / Book Title: | Human Molecular Genetics |
Volume: | 31 |
Issue: | 20 |
Copyright Statement: | © The Author(s) 2022. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
Keywords: | Exome Genome-Wide Association Study Humans Mendelian Randomization Analysis Polymorphism, Single Nucleotide Triglycerides VA Million Veteran Program Humans Triglycerides Polymorphism, Single Nucleotide Genome-Wide Association Study Mendelian Randomization Analysis Exome Genetics & Heredity 06 Biological Sciences 11 Medical and Health Sciences |
Publication Status: | Published |
Conference Place: | England |
Online Publication Date: | 2022-03-02 |
Appears in Collections: | Faculty of Medicine School of Public Health |
This item is licensed under a Creative Commons License