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Genome-wide association and HLA fine-mapping studies identify risk loci and genetic pathways underlying allergic rhinitis
File | Description | Size | Format | |
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Waage-NG-2018_accepted.pdf | Accepted version | 2.38 MB | Adobe PDF | View/Open |
Title: | Genome-wide association and HLA fine-mapping studies identify risk loci and genetic pathways underlying allergic rhinitis |
Authors: | Waage, J Standl, M Curtin, JA Jessen, L Thorsen, J The 23andMe Research Team AAGC Collaborators Abdellaoui, A Ahluwalia, TS Alves, A Amaral, AFS Anto, JM Arnold, A Flores, C Baurecht, H Beijstervedldt, TCEM Bleecker, ER Bonas-Guarch, S Boomsma, D Brix, S Bunyavanich, S Burchard, E Chen, Z Curjuric, I Custovic, A Den Dekker, M Dharmage, SC Dmitrieva, J Duijts, L Ege, M Barreto-Luis, A Gauderman, WJ Georges, M Gieger, C Gilliland, F Granell, R Gui, H Hansen, T Heinrich, J Henderson, J Hernandez-Pacheco, N Hinds, DA Holt, P Imboden, M Jaddoe, V Jarvelin, M Jarvis, D Jensen, KK Jonsdottir, I Kabesch, M Kaprio, J Kumar, A Lee, Y Levin, AM Li, X Lorenz-Diaz, F Melen, E Mercader, JM Meyers, DA Nicolae, DL Nohr, E Palvianinen, T Paternoster, L Pennell, C Pershagen, G Pino-Yanes, M Probst-Hensch, NM Ruschendorf, F Schoettler, N Simpson, A Stefansson, K Sunyer, J Sveinbjornsson, G Thiering, E Thompson, PJ Tian, C Torrent, M Torrents, D Tung, JY Wang, C Weidinger, S Weiss, S Willemsen, G Williams, LK Ober, C Ferreira, MA Bisgaard, H Strachan, D Bonnelykke, K |
Item Type: | Journal Article |
Abstract: | Allergic rhinitis is the most common clinical presentation of allergy, affecting 400 million people worldwide, and with increasing incidence in westernized countries.1,2 To elucidate the genetic architecture and understand disease mechanisms of allergic rhinitis, we carried out a meta-analysis of allergic rhinitis in 59,762 cases and 152,358 controls of European ancestry and identified a total of 41 risk loci for allergic rhinitis, including 20 loci not previously associated with allergic rhinitis, which were confirmed in a replication phase of 60,720 cases and 618,527 controls. Functional annotation implied genes involved in various immune pathways, and fine mapping of the HLA region suggested amino acid variants of importance for antigen binding. We further performed GWASs of allergic sensitization against inhalant allergens and non-allergic rhinitis suggesting shared genetic mechanisms across rhinitis-related traits. Future studies of the identified loci and genes might identify novel targets for treatment and prevention of allergic rhinitis. |
Issue Date: | 1-Aug-2018 |
Date of Acceptance: | 10-May-2018 |
URI: | http://hdl.handle.net/10044/1/60029 |
DOI: | 10.1038/s41588-018-0157-1 |
ISSN: | 1061-4036 |
Publisher: | Nature Publishing Group |
Start Page: | 1072 |
End Page: | 1080 |
Journal / Book Title: | Nature Genetics |
Volume: | 50 |
Issue: | 8 |
Copyright Statement: | © 2018 Nature Research. The final publication is available at Springer via https://doi.org/10.1038/s41588-018-0157-1 |
Keywords: | Science & Technology Life Sciences & Biomedicine Genetics & Heredity HAY-FEVER CELL DEVELOPMENT DENDRITIC CELLS EXPRESSION VARIANTS ASTHMA RECEPTOR HERITABILITY METAANALYSIS DISEASES Allergens Case-Control Studies Genetic Loci Genetic Predisposition to Disease Genetic Variation Genome, Human Genome-Wide Association Study HLA Antigens Humans Phenotype Rhinitis, Allergic Risk 23andMe Research Team AAGC collaborators Humans Genetic Predisposition to Disease Allergens HLA Antigens Risk Case-Control Studies Phenotype Genome, Human Genetic Variation Genome-Wide Association Study Genetic Loci Rhinitis, Allergic 06 Biological Sciences 11 Medical and Health Sciences Developmental Biology |
Publication Status: | Published |
Online Publication Date: | 2018-07-16 |
Appears in Collections: | Department of Infectious Diseases National Heart and Lung Institute Faculty of Medicine School of Public Health |