10
IRUS Total
Downloads
  Altmetric

Chemical Boltzmann Machines

File Description SizeFormat 
1707.06221v1.pdfAccepted version2.66 MBAdobe PDFView/Open
Title: Chemical Boltzmann Machines
Authors: Poole, W
Ortiz-Muñoz, A
Behera, A
Jones, NS
Ouldridge, TE
Winfree, E
Gopalkrishnan, M
Item Type: Journal Article
Abstract: How smart can a micron-sized bag of chemicals be? How can an artificial or real cell make inferences about its environment? From which kinds of probability distributions can chemical reaction networks sample? We begin tackling these questions by showing four ways in which a stochastic chemical reaction network can implement a Boltzmann machine, a stochastic neural network model that can generate a wide range of probability distributions and compute conditional probabilities. The resulting models, and the associated theorems, provide a road map for constructing chemical reaction networks that exploit their native stochasticity as a computational resource. Finally, to show the potential of our models, we simulate a chemical Boltzmann machine to classify and generate MNIST digits in-silico.
Issue Date: 24-Aug-2017
Date of Acceptance: 12-Jun-2017
URI: http://hdl.handle.net/10044/1/53171
DOI: https://dx.doi.org/10.1007/978-3-319-66799-7_14
ISSN: 0302-9743
Publisher: Springer Verlag
Start Page: 210
End Page: 231
Journal / Book Title: Lecture Notes in Computer Science
Volume: 10467
Copyright Statement: The final publication is available at Springer via http://dx.doi.org/10.1007/978-3-319-66799-7_14
Sponsor/Funder: The Royal Society
Funder's Grant Number: UF150067
Keywords: q-bio.MN
08 Information And Computing Sciences
Artificial Intelligence & Image Processing
Notes: To Appear at DNA 23 Conference
Publication Status: Published
Appears in Collections:Bioengineering
Applied Mathematics and Mathematical Physics
Faculty of Natural Sciences
Faculty of Engineering
Mathematics