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A lightweight supercomputing web portal for inferring phylogenetic trees
| File | Description | Size | Format | |
|---|---|---|---|---|
 eScience09_Johnson_Meade-preprint.pdf | Accepted version | 354.56 kB | Adobe PDF | View/Open |
| Title: | A lightweight supercomputing web portal for inferring phylogenetic trees |
| Authors: | Johnson, D Meade, A Alexandrov, VN |
| Item Type: | Conference Paper |
| Abstract: | In this paper we describe a lightweight Web portal developed for running computational jobs on a IBM JS21 Bladecenter cluster, ThamesBlue, for inferring and analyzing evolutionary histories. We first discuss the need for leveraging HPC as a enabler for molecular phylogenetics research. We go on to describe how the portal is designed to interface with existing open-source software that is typical of a HPC resource configuration, and how by design this portal is generic enough to be portable to other similarly configured compute clusters, and for other applications. |
| Issue Date: | 31-Dec-2009 |
| URI: | http://hdl.handle.net/10044/1/11582 |
| DOI: | http:dx.doi.org/10.1109/ESCIW.2009.5407990 |
| ISBN: | 9781424459469 |
| Publisher: | IEEE |
| Start Page: | 92 |
| End Page: | 95 |
| Copyright Statement: | © 2009 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works |
| Conference Name: | 2009 5th IEEE International Conference on e-Science Workshops |
| Publication Status: | Published |
| Start Date: | 2009-12-09 |
| Finish Date: | 2009-12-11 |
| Conference Place: | Oxford, UK |
| Appears in Collections: | Computing |