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Results 1-10 of 28
Publication DateTitleAuthor(s)
7-Apr-2017Thermodynamics of computational copying in biochemical systemsOuldridge, TE; Govern, CC; Wolde, PRT
21-Mar-2017Multiscale simulations of anisotropic particles combining molecular dynamics and Green's function reaction dynamicsVijaykumar, A; Ouldridge, TE; Ten Wolde, PR; Bolhuis, PG
1-Oct-2013DNA hybridization kinetics: zippering, internal displacement and sequence dependenceOuldridge, TE; Sulc, P; Romano, F; Doye, JPK; Louis, AA
14-Oct-2012Inferring bulk self-assembly properties from simulations of small systems with multiple constituent species and small systems in the grand canonical ensembleOuldridge, TE
28-Feb-2011Structural, mechanical, and thermodynamic properties of a coarse-grained DNA modelOuldridge, TE; Louis, AA; Doye, JPK
27-Sep-2012DNA Cruciform Arms Nucleate through a Correlated but Asynchronous Cooperative MechanismMatek, C; Ouldridge, TE; Levy, A; Doye, JPK; Louis, AA
7-Jan-2015Plectoneme tip bubbles: Coupled denaturation and writhing in supercoiled DNAMatek, C; Ouldridge, TE; Doye, JPK; Louis, AA
7-Jun-2012The effect of topology on the structure and free energy landscape of DNA kissing complexesRomano, F; Hudson, A; Doye, JPK; Ouldridge, TE; Louis, AA
17-Mar-2010Extracting bulk properties of self-assembling systems from small simulationsOuldridge, TE; Louis, AA; Doye, JPK
1-Jan-2013Coarse-graining DNA for simulations of DNA nanotechnologyDoye, JPK; Ouldridge, TE; Louis, AA; Romano, F; Sulc, P, et al