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Issue DateTitleAuthor(s)
29-Jun-2017HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequencesRatmann, O; Wymant, C; Colijn, C; Danaviah, S; Essex, M, et al
1-Jun-2018Comparison of cluster-based and source-attribution methods for estimating transmission risk using large HIV sequence databasesLe Vu, SOK; Ratmann, O; Delpech, V; Brown, AE; Gill, ON, et al
20-Jun-2018Cultural conformity generates extremely stable traditions in bird songLachlan, RF; Ratmann, O; Nowicki, S; Medical Research Council (MRC); Bill & Melinda Gates Foundation
23-Nov-2017PHYLOSCANNER: inferring transmission from within- and between-host pathogen genetic diversityWymant, C; Hall, M; Ratmann, O; Bonsall, D; Golubchik, T, et al
3-Oct-2017Improved algorithmic complexity for the 3SEQ recombination detection algorithmRatmann, O; Ha Minh Lam; Boni, MF; Medical Research Council (MRC); Bill & Melinda Gates Foundation
1-Sep-2017Improved prediction accuracy for disease risk mapping using Gaussian process stacked generalization.Bhatt, S; Cameron, E; Flaxman, SR; Weiss, DJ; Smith, DL, et al
23-Apr-2018Molecular epidemiology of HIV-1 subtype B reveals heterogeneous transmission risk: Implications for intervention and controlVolz, E; Le Vu, S; Ratmann, O; Tostevin, A; Orkin, C, et al
6-Jul-2019HIV-1 transmission patterns in men who have sex with men: insights from genetic source attribution analysis.Le Vu, S; Ratmann, O; Delpech, V; Brown, AE; Gill, ON, et al
1-May-2019PANGEA-HIV 2: Phylogenetics and networks for generalised epidemics in AfricaAbeler-Dorner, L; Grabowski, MK; Rambaut, A; Pillay, D; Fraser, C, et al
Dec-2018Spatial mapping with Gaussian processes and nonstationary Fourier featuresTon, J-F; Flaxman, S; Sejdinovic, D; Bhatt, S; Medical Research Council (MRC), et al