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A study of vectorization for matrix-free finite element methods
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1094342020945005.pdf | Published version | 1.96 MB | Adobe PDF | View/Open |
Title: | A study of vectorization for matrix-free finite element methods |
Authors: | Sun, T Mitchell, L Kulkarni, K Klockner, A Ham, DA Kelly, PHJ |
Item Type: | Journal Article |
Abstract: | Vectorization is increasingly important to achieve high performance on modern hardware with SIMD instructions. Assembly of matrices and vectors in the finite element method, which is characterized by iterating a local assembly kernel over unstructured meshes, poses difficulties to effective vectorization. Maintaining a user-friendly high-level interface with a suitable degree of abstraction while generating efficient, vectorized code for the finite element method is a challenge for numerical software systems and libraries. In this work, we study cross-element vectorization in the finite element framework Firedrake via code transformation and demonstrate the efficacy of such an approach by evaluating a wide range of matrix-free operators spanning different polynomial degrees and discretizations on two recent CPUs using three mainstream compilers. Our experiments show that our approaches for cross-element vectorization achieve 30% of theoretical peak performance for many examples of practical significance, and exceed 50% for cases with high arithmetic intensities, with consistent speed-up over (intra-element) vectorization restricted to the local assembly kernels. |
Issue Date: | 31-Jul-2020 |
Date of Acceptance: | 1-Jul-2020 |
URI: | http://hdl.handle.net/10044/1/90136 |
DOI: | 10.1177/1094342020945005 |
ISSN: | 1094-3420 |
Publisher: | SAGE Publications |
Start Page: | 629 |
End Page: | 644 |
Journal / Book Title: | International Journal of High Performance Computing Applications |
Volume: | 34 |
Issue: | 6 |
Copyright Statement: | © The Author(s) 2020. This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
Keywords: | Science & Technology Technology Computer Science, Hardware & Architecture Computer Science, Interdisciplinary Applications Computer Science, Theory & Methods Computer Science Finite element method vectorization global assembly code generation Science & Technology Technology Computer Science, Hardware & Architecture Computer Science, Interdisciplinary Applications Computer Science, Theory & Methods Computer Science Finite element method vectorization global assembly code generation cs.MS cs.MS Distributed Computing 0805 Distributed Computing |
Publication Status: | Published |
Article Number: | ARTN 1094342020945005 |
Online Publication Date: | 2020-07-31 |
Appears in Collections: | Computing Applied Mathematics and Mathematical Physics Grantham Institute for Climate Change Faculty of Natural Sciences Mathematics |
This item is licensed under a Creative Commons License