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Results 1-10 of 25
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Issue DateTitleAuthor(s)
29-Jun-2017HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequencesRatmann, O; Wymant, C; Colijn, C; Danaviah, S; Essex, M, et al
14-May-2013Traumatic brain injury impairs small-world topologyPandit, AS; Expert, P; Lambiotte, R; Bonnelle, V; Leech, R, et al
18-Apr-2014OutbreakTools: A new platform for disease outbreak analysis using the R softwareJombart, T; Aanensen, DM; Baguelin, M; Birrell, P; Cauchemez, S, et al
1-Jun-2018Comparison of cluster-based and source-attribution methods for estimating transmission risk using large HIV sequence databasesLe Vu, SOK; Ratmann, O; Delpech, V; Brown, AE; Gill, ON, et al
7-Oct-2016Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparisonRatmann, O; Hodcroft, EB; Pickles, M; Cori, A; Hall, M, et al
20-Jun-2018Cultural conformity generates extremely stable traditions in bird songLachlan, RF; Ratmann, O; Nowicki, S; Medical Research Council (MRC); Bill & Melinda Gates Foundation
23-Nov-2017PHYLOSCANNER: inferring transmission from within- and between-host pathogen genetic diversityWymant, C; Hall, M; Ratmann, O; Bonsall, D; Golubchik, T, et al
27-Oct-2016Evolution of cell-to-cell variability in stochastic, controlled, heteroplasmic mtDNA populationsJohnston, IG; Jones, NS; Medical Research Council (MRC); Engineering & Physical Science Research Council (EPSRC)
15-May-2017Treespace: statistical exploration of landscapes of phylogenetic treesJombart, T; Kendall, M; Almagro-Garcia, J; Colijn, C; Engineering & Physical Science Research Council (EPSRC), et al
19-Jan-2017Genomic infectious disease epidemiology in partially sampled and ongoing outbreaksDidelot, X; Fraser, C; Gardy, J; Colijn, C; Engineering & Physical Science Research Council (EPSRC), et al