The role of hosts, plasmids and environment in determining plasmid transfer rates: a meta-analysis
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Accepted version
Author(s)
Sheppard, Richard
Beddis, Alice
Barraclough, Timothy
Type
Journal Article
Abstract
Plasmids transfer at highly variable rates which spread over 10 orders of magnitude. While rates have been measured for decades and it is known that the rates are affected by biotic and abiotic factors, it is unclear how and to what extent these factors determine the rates of transfer. We performed a meta-analysis of 1224 published transfer rates from 33 papers (filtered to 612 transfer rates) to assess this variation. Over three quarters of the variation can be predicted, with plasmid repression and media type (solid versus liquid) identified as general variables explaining the most variation. Of the host and plasmid identities, identity of the recipient bacterium explained the most variation, up to 34% in some models, and more than any other explanatory variable. These results emphasize the role of the recipient in determining the rate of transfer, and show an improved range of transfer values and their correlates that can be used in future when modeling plasmid persistence.
Date Issued
2020-03-01
Date Acceptance
2019-12-08
Citation
Plasmid, 2020, 108
ISSN
0147-619X
Publisher
Elsevier
Journal / Book Title
Plasmid
Volume
108
Copyright Statement
© 2019 Elsevier Ltd. All rights reserved. This manuscript is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International Licence http://creativecommons.org/licenses/by-nc-nd/4.0/
Identifier
https://www.sciencedirect.com/science/article/pii/S0147619X20300019?via%3Dihub
Subjects
Science & Technology
Life Sciences & Biomedicine
Genetics & Heredity
Microbiology
Horizontal gene transfer
Meta-analysis
Plasmid transfer rate
Conjugation
HORIZONTAL GENE-TRANSFER
A-PRIORI CONDITIONS
RESISTANCE PLASMIDS
POPULATION BIOLOGY
BACTERIAL PLASMIDS
TRANSMISSION
EXISTENCE
EVOLUTION
DYNAMICS
SYSTEM
Conjugation
Horizontal gene transfer
Meta-analysis
Plasmid transfer rate
Microbiology
0604 Genetics
Publication Status
Published
Article Number
ARTN 102489
Date Publish Online
2020-01-10