Statistical correlations between NMR spectroscopy and direct infusion FT-ICR mass spectrometry aid annotation of unknowns in metabolomics
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Accepted version
Published version
Author(s)
Type
Journal Article
Abstract
NMR spectroscopy and mass spectrometry are the two major analytical platforms for metabolomics, and both generate
substantial data with hundreds to thousands of observed peaks for a single sample. Many of these are unknown, and peak assignment
is generally complex and time-consuming. Statistical correlations between data types have proven useful in expediting this process,
for example in prioritizing candidate assignments. However, this approach has not been formally assessed for the comparison of
direct-infusion mass spectrometry (DIMS) and NMR data. Here, we present a systematic analysis of a sample set (tissue extracts),
and the utility of a simple correlation threshold to aid metabolite identification. The correlations were surprisingly successful in
linking structurally related signals, with 15 of 26 NMR-detectable metabolites having their highest correlation to a cognate MS ion.
However, we found that the distribution of the correlations was highly dependent on the nature of the MS ion, such as the adduct
type. This approach should help to alleviate this important bottleneck where both 1D NMR and DIMS datasets have been collected.
substantial data with hundreds to thousands of observed peaks for a single sample. Many of these are unknown, and peak assignment
is generally complex and time-consuming. Statistical correlations between data types have proven useful in expediting this process,
for example in prioritizing candidate assignments. However, this approach has not been formally assessed for the comparison of
direct-infusion mass spectrometry (DIMS) and NMR data. Here, we present a systematic analysis of a sample set (tissue extracts),
and the utility of a simple correlation threshold to aid metabolite identification. The correlations were surprisingly successful in
linking structurally related signals, with 15 of 26 NMR-detectable metabolites having their highest correlation to a cognate MS ion.
However, we found that the distribution of the correlations was highly dependent on the nature of the MS ion, such as the adduct
type. This approach should help to alleviate this important bottleneck where both 1D NMR and DIMS datasets have been collected.
Date Issued
2016-01-29
Date Acceptance
2016-01-29
Citation
Analytical Chemistry, 2016, 88 (5), pp.2583-2589
ISSN
1520-6882
Publisher
American Chemical Society
Start Page
2583
End Page
2589
Journal / Book Title
Analytical Chemistry
Volume
88
Issue
5
Copyright Statement
This is an open access article published under a Creative Commons Attribution (CC-BY)
License, which permits unrestricted use, distribution and reproduction in any medium,
provided the author and source are cited.
License, which permits unrestricted use, distribution and reproduction in any medium,
provided the author and source are cited.
License URL
Sponsor
Natural Environment Research Council (NERC)
Commission of the European Communities
Grant Number
NE/H009973/1
312941
Subjects
Science & Technology
Physical Sciences
Chemistry, Analytical
Chemistry
MAGNETIC-RESONANCE-SPECTROSCOPY
METABOLITE IDENTIFICATION
RATIO ANALYSIS
MIXTURES
H-1-NMR
HETEROSPECTROSCOPY
EARTHWORMS
TOXICOLOGY
SPECTRA
URINE
Analytical Chemistry
0301 Analytical Chemistry
0904 Chemical Engineering
0399 Other Chemical Sciences
Publication Status
Published