Synthetic spatial patterning in bacteria: advances based on novel diffusible signals
File(s)
Author(s)
Oliver-Huidobro, Martina
Tica, Jure
Wachter, Georg
Isalan, Mark
Type
Journal Article
Abstract
Engineering multicellular patterning may help in the understanding of some fundamental laws of pattern formation and thus may contribute to the field of developmental biology. Furthermore, advanced spatial control over gene expression may revolutionize fields such as medicine, through organoid or tissue engineering. To date, foundational advances in spatial synthetic biology have often been made in prokaryotes, using artificial gene circuits. In this review, engineered patterns are classified into four levels of increasing complexity, ranging from spatial systems with no diffusible signals to systems with complex multi-diffusor interactions. This classification highlights how the field was held back by a lack of diffusible components. Consequently, we provide a summary of both previously characterized and some new potential candidate small-molecule signals that can regulate gene expression in Escherichia coli. These diffusive signals will help synthetic biologists to successfully engineer increasingly intricate, robust and tuneable spatial structures.
Date Issued
2022-06-01
Date Acceptance
2021-11-14
Citation
Microbial Biotechnology, 2022, 15 (6), pp.1685-1694
ISSN
1751-7907
Publisher
Wiley
Start Page
1685
End Page
1694
Journal / Book Title
Microbial Biotechnology
Volume
15
Issue
6
Copyright Statement
© 2021 The Authors. Microbial Biotechnology published by Society for Applied Microbiology and John Wiley & Sons Ltd.
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
License URL
Sponsor
VolkwagenStiftung
Identifier
https://sfamjournals.onlinelibrary.wiley.com/doi/10.1111/1751-7915.13979
Grant Number
63062
Subjects
Science & Technology
Life Sciences & Biomedicine
Biotechnology & Applied Microbiology
Microbiology
BIOSYNTHETIC-PATHWAY
ACID BIOSYNTHESIS
ESCHERICHIA-COLI
E. COLI
GENE
EXPRESSION
DESIGN
SYSTEM
DEGRADATION
FLAVONOIDS
Bacteria
Escherichia coli
Gene Regulatory Networks
Synthetic Biology
Bacteria
Escherichia coli
Gene Regulatory Networks
Synthetic Biology
0605 Microbiology
Publication Status
Published
Date Publish Online
2021-11-29