Platinum-based chemotherapy induces methylation changes in blood DNA associated with overall survival in ovarian cancer patients
File(s)Flanagan et al CCR 2016.pdf (2.2 MB)
Accepted version
Author(s)
Type
Journal Article
Abstract
PURPOSE: DNA damage repair can lead to epigenetic changes. DNA mismatch repair proteins bind to platinum DNA adducts and at sites of DNA damage can recruit the DNA methylating enzyme DNMT1, resulting in aberrant methylation. We hypothesised that DNA damage repair during platinum-based chemotherapy may cause aberrant DNA methylation in normal tissues of patients such as blood. EXPERIMENTAL DESIGN: We used Illumina 450k methylation arrays and bisulphite pyrosequencing to investigate methylation at presentation and relapse in blood DNA from ovarian cancer patients enrolled in the SCOTROC1 trial (n=247) and in a cohort of ovarian tumour DNA samples collected at first relapse (n=46). We used an ovarian cancer cell line model to investigate the role of the DNA mismatch repair gene MLH1 in platinum induced methylation changes. RESULTS: Specific CpG methylation changes in blood at relapse are observed following platinum-based chemotherapy and are associated with patient survival, independent of other clinical factors (HR=3.7; 95%CI 1.8-7.6, p=2.8x10-4). Similar changes occur in ovarian tumours at relapse, also associate with patient survival (HR=2.6; 95%CI 1.0-6.8, p=0.048). Using an ovarian cancer cell line model, we demonstrate that functional mismatch repair (MMR) increases the frequency of platinum-induced methylation. CONCLUSION: DNA methylation in blood at relapse following chemotherapy, and not at presentation, is informative about ovarian cancer patient survival. Functional DNA mismatch repair increases the frequency of DNA methylation changes induced by platinum. DNA methylation in blood following chemotherapy could provide a non-invasive means of monitoring patients' epigenetic responses to treatment without requiring a tumour biopsy.
Date Issued
2017-05-01
Date Acceptance
2016-09-06
Citation
Clinical Cancer Research, 2017, 23 (9), pp.2213-2222
ISSN
1557-3265
Publisher
American Association for Cancer Research
Start Page
2213
End Page
2222
Journal / Book Title
Clinical Cancer Research
Volume
23
Issue
9
Copyright Statement
© 2016, American Association for Cancer Research.
Sponsor
Ovarian Cancer Action
Imperial College Healthcare NHS Trust- BRC Funding
Cancer Research UK
National Institute for Health Research
Cancer Research UK
Identifier
PII: 1078-0432.CCR-16-1754
Grant Number
N/A
RDB01 79560
15589
RDEMC 79560
13086
Subjects
Science & Technology
Life Sciences & Biomedicine
Oncology
1ST-LINE CHEMOTHERAPY
COMBINATIONS
CARBOPLATIN
DISEASE
GENES
Aged
Cell Line, Tumor
DNA Adducts
DNA Damage
DNA Methylation
DNA Repair
DNA, Neoplasm
Drug Resistance, Neoplasm
Female
Gene Expression Regulation, Neoplastic
Humans
Middle Aged
Neoplasm Recurrence, Local
Ovarian Neoplasms
Platinum
Promoter Regions, Genetic
Cell Line, Tumor
Humans
Ovarian Neoplasms
Neoplasm Recurrence, Local
DNA Damage
Platinum
DNA Adducts
DNA, Neoplasm
DNA Methylation
DNA Repair
Gene Expression Regulation, Neoplastic
Drug Resistance, Neoplasm
Aged
Middle Aged
Female
Promoter Regions, Genetic
1112 Oncology and Carcinogenesis
Oncology & Carcinogenesis
Publication Status
Published
Date Publish Online
2016-09-23