Structures of Class I and Class II transcription complexes reveal the molecular basis of RamA-dependent transcription activation
Author(s)
Type
Journal Article
Abstract
Transcription activator RamA is linked to multidrug resistance of Klebsiella pneumoniae through controlling genes that encode efflux pumps (acrA) and porin-regulating antisense RNA (micF). In bacteria, σ70, together with activators, controls the majority of genes by recruiting RNA polymerase (RNAP) to the promoter regions. RNAP and σ70 form a holoenzyme that recognizes -35 and -10 promoter DNA consensus sites. Many activators bind upstream from the holoenzyme and can be broadly divided into two classes. RamA acts as a class I activator on acrA and class II activator on micF, respectively. The authors present biochemical and structural data on RamA in complex with RNAP-σ70 at the two promoters and the data reveal the molecular basis for how RamA assembles and interacts with core RNAP and activates transcription that contributes to antibiotic resistance. Further, comparing with CAP/TAP complexes reveals common and activator-specific features in activator binding and uncovers distinct roles of the two C-terminal domains of RNAP α subunit.
Date Issued
2022-02-02
Date Acceptance
2021-11-01
Citation
Advanced Science, 2022, 9 (4), pp.1-10
ISSN
2198-3844
Publisher
Wiley Open Access
Start Page
1
End Page
10
Journal / Book Title
Advanced Science
Volume
9
Issue
4
Copyright Statement
© 2021 The Authors. Advanced Science published by Wiley-VCH GmbH
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
License URL
Sponsor
Medical Research Council (MRC)
Wellcome Trust
Wellcome Trust
Biotechnology and Biological Sciences Research Council (BBSRC)
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000716835900001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Grant Number
MR/N006828/1
206175/Z/17/Z
221548/Z/20/Z
BB/N007816/1
Subjects
Science & Technology
Physical Sciences
Technology
Chemistry, Multidisciplinary
Nanoscience & Nanotechnology
Materials Science, Multidisciplinary
Chemistry
Science & Technology - Other Topics
Materials Science
antibiotic resistance
class I and class II activators
cryoEM structures
RamA
RNAP-sigma(70)
ESCHERICHIA-COLI
RNA-POLYMERASE
EM STRUCTURE
DNA-BINDING
MARA
INITIATION
PROTEIN
REQUIREMENTS
REFINEMENT
RESISTANCE
Publication Status
Published
Article Number
ARTN 2103669
Date Publish Online
2021-11-10