Lossless compression of intracortical extracellular neural recordings using non-adaptive huffman encoding
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Accepted version
Author(s)
Savolainen, Oscar W
Constandinou, Timothy G
Type
Conference Paper
Abstract
This paper investigates the effectiveness of four Huffman-based compression schemes for different intracortical neural signals and sample resolutions. The motivation is to find effective lossless, low-complexity data compression schemes for Wireless Intracortical Brain-Machine Interfaces (WI-BMI). The considered schemes include pre-trained Lone 1st and 2nd order encoding [1], pre-trained Delta encoding, and pre-trained Linear Neural Network Time (LNNT) encoding [2]. Maximum codeword-length limited versions are also considered to protect against overfit to training data. The considered signals are the Extracellular Action Potential signal, the Entire Spiking Activity signal, and the Local Field Potential signal. Sample resolutions of 5 to 13 bits are considered. The result show that overfit-protection dramatically improves compression, especially at higher sample resolutions. Across signals, 2nd order encoding generally performed best at lower sample resolutions, and 1st order, Delta and LNNT encoding performed best at higher sample resolutions. The proposed methods should generalise to other remote sensing applications where the distribution of the sensed data can be estimated a priori.
Date Issued
2020-07-20
Date Acceptance
2020-04-15
Citation
42nd Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society (EMBC), 2020, pp.4318-4321
ISSN
1557-170X
Publisher
IEEE
Start Page
4318
End Page
4321
Journal / Book Title
42nd Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society (EMBC)
Copyright Statement
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Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000621592204160&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Source
42nd Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society (EMBC)
Subjects
Science & Technology
Technology
Engineering, Biomedical
Engineering, Electrical & Electronic
Engineering
Publication Status
Published
Start Date
2020-07-20
Finish Date
2020-07-24
Coverage Spatial
Montreal, Canada