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  5. Large-scale parameter estimation for crystal structure prediction. Part 1: dataset, methodology, and implementation
 
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Large-scale parameter estimation for crystal structure prediction. Part 1: dataset, methodology, and implementation
File(s)
large-scale-parameter-estimation-for-crystal-structure-prediction-part-1-dataset-methodology-a.pdf (4.58 MB)
Published version
Author(s)
Bowskill, DH
Tan, BI
Keates, A
Sugden, IJ
Adjiman, CS
more
Type
Journal Article
Abstract
Crystal structure prediction (CSP) seeks to identify all thermodynamically accessible solid forms of a given compound and, crucially, to establish the relative thermodynamic stability between different polymorphs. The conventional hierarchical CSP workflow suggests that no single energy model can fulfill the needs of all stages in the workflow, and energy models across a spectrum of fidelities and computational costs are required. Hybrid ab initio/empirical force-field (HAIEFF) models have demonstrated a good balance of these two factors, but the force-field component presents a major bottleneck for model accuracy. Existing parameter estimation tools for fitting this empirical component are inefficient and have severe limitations on the manageable problem size. This, combined with a lack of reliable reference data for parameter fitting, has resulted in development in the force-field component of HAIEFF models having mostly stagnated. In this work, we address these barriers to progress. First, we introduce a curated database of 755 organic crystal structures, obtained using high quality, solid-state DFT-D calculations, which provide a complete set of geometry and energy data. Comparisons to various theoretical and experimental data sources indicate that this database provides suitable diversity for parameter fitting. In tandem, we also put forward a new parameter estimation algorithm implemented as the CrystalEstimator program. Our tests demonstrate that CrystalEstimator is capable of efficiently handling large-scale parameter estimation problems, simultaneously fitting as many as 62 model parameters based on data from 445 structures. This problem size far exceeds any previously reported works related to CSP force-field parametrization. These developments form a strong foundation for all future work involving parameter estimation of transferable or tailor-made force-fields for HAIEFF models. This ultimately opens the way for significant improvements in the accuracy achieved by the HAIEFF models.
Date Issued
2024-11-26
Date Acceptance
2024-10-08
Citation
Journal of Chemical Theory and Computation, 2024, 20 (22), pp.10288-10315
URI
https://hdl.handle.net/10044/1/125257
URL
https://pubs.acs.org/doi/10.1021/acs.jctc.4c01091
DOI
https://www.dx.doi.org/10.1021/acs.jctc.4c01091
ISSN
1549-9618
Publisher
American Chemical Society
Start Page
10288
End Page
10315
Journal / Book Title
Journal of Chemical Theory and Computation
Volume
20
Issue
22
Copyright Statement
© 2024 The Authors. Published by American Chemical Society. This publication is licensed under CC-BY 4.0.
License URL
http://creativecommons.org/licenses/by/4.0/
Identifier
https://www.ncbi.nlm.nih.gov/pubmed/39531362
Subjects
Chemistry
Chemistry, Physical
DENSITY-FUNCTIONAL THEORY
GRAPH-SET ANALYSIS
INTERMOLECULAR FORCE-FIELD
N-HETEROCYCLIC COMPOUNDS
NONBONDED POTENTIAL PARAMETERS
ORGANIC MOLECULAR-CRYSTALS
Physical Sciences
Physics
Physics, Atomic, Molecular & Chemical
Science & Technology
SUBLIMATION ENTHALPIES
THERMOCHEMICAL PROPERTIES
THERMODYNAMIC PROPERTIES
VAPOR-PRESSURES
Publication Status
Published
Coverage Spatial
United States
Date Publish Online
2024-11-12
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