The Association of Low-Penetrance Variants in DNA Repair Genes with Colorectal Cancer: A Systematic Review and Meta-Analysis
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Author(s)
Type
Journal Article
Abstract
OBJECTIVES: Approximately 35% of colorectal cancer (CRC) risk is attributable to heritable factors known hereditary syndromes,
accounting for 6%. The remainder may be due to lower penetrance polymorphisms particularly of DNA repair genes. DNA repair
pathways, including base excision repair (BER), nucleotide excision repair (NER), mismatch repair (MMR), direct reversal repair
(DRR), and double-strand break repair are complex, evolutionarily conserved, and critical in carcinogenesis. Germline mutations in
these genes are associated with high-penetrance CRC syndromes such as Lynch syndrome. However, the association of lowpenetrance
polymorphisms of DNA repair genes with CRC risk remains unclear.
METHODS: A systematic literature review of PubMed, Embase, and HuGENet databases was conducted. Pre-specified criteria
determined study inclusion/exclusion. Per-allele, pooled odds ratios disclosed the risk attributed to each variant. Heterogeneity
was investigated by subgroup analyses for ethnicity and tumor location; funnel plots and Egger’s test assessed publication bias.
RESULTS: Sixty-one polymorphisms in 26 different DNA repair genes were identified. Meta-analyses for 22 polymorphisms in 17
genes revealed that six polymorphisms were significantly associated with CRC risk within BER (APE1, PARP1), NER (ERCC5, XPC),
double-strand break (RAD18), and DRR (MGMT), but none within MMR. Subgroup analyses revealed significant association of
OGG1 rs1052133 with rectal cancer risk. Egger’s test revealed no publication bias.
CONCLUSIONS: Low-penetrance polymorphisms in DNA repair genes alter susceptibility to CRC. Future studies should therefore
analyze whole-genome polymorphisms and any synergistic effects on CRC risk.
TRANSLATIONAL IMPACT: This knowledge may enhance CRC risk assessment and facilitate a more personalized approach to
cancer prevention.
accounting for 6%. The remainder may be due to lower penetrance polymorphisms particularly of DNA repair genes. DNA repair
pathways, including base excision repair (BER), nucleotide excision repair (NER), mismatch repair (MMR), direct reversal repair
(DRR), and double-strand break repair are complex, evolutionarily conserved, and critical in carcinogenesis. Germline mutations in
these genes are associated with high-penetrance CRC syndromes such as Lynch syndrome. However, the association of lowpenetrance
polymorphisms of DNA repair genes with CRC risk remains unclear.
METHODS: A systematic literature review of PubMed, Embase, and HuGENet databases was conducted. Pre-specified criteria
determined study inclusion/exclusion. Per-allele, pooled odds ratios disclosed the risk attributed to each variant. Heterogeneity
was investigated by subgroup analyses for ethnicity and tumor location; funnel plots and Egger’s test assessed publication bias.
RESULTS: Sixty-one polymorphisms in 26 different DNA repair genes were identified. Meta-analyses for 22 polymorphisms in 17
genes revealed that six polymorphisms were significantly associated with CRC risk within BER (APE1, PARP1), NER (ERCC5, XPC),
double-strand break (RAD18), and DRR (MGMT), but none within MMR. Subgroup analyses revealed significant association of
OGG1 rs1052133 with rectal cancer risk. Egger’s test revealed no publication bias.
CONCLUSIONS: Low-penetrance polymorphisms in DNA repair genes alter susceptibility to CRC. Future studies should therefore
analyze whole-genome polymorphisms and any synergistic effects on CRC risk.
TRANSLATIONAL IMPACT: This knowledge may enhance CRC risk assessment and facilitate a more personalized approach to
cancer prevention.
Date Issued
2017-07-27
Date Acceptance
2017-06-12
Citation
Clinical and Translational Gastroenterology, 2017, 8
ISSN
2155-384X
Publisher
Nature Publishing Group
Journal / Book Title
Clinical and Translational Gastroenterology
Volume
8
Copyright Statement
Clinical and Translational Gastroenterology is an openaccess
journal published by Nature Publishing Group.
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©The Author(s) 2017
journal published by Nature Publishing Group.
This work is licensed under a Creative Commons AttributionNonCommercial-ShareAlike
4.0 International License. The images or
other third party material in this article are included in the article’s
Creative Commons license, unless indicated otherwise in the credit line;
if the material is not included under the Creative Commons license,
users will need to obtain permission from the license holder to
reproduce the material. To view a copy of this license, visit http://
creativecommons.org/licenses/by-nc-sa/4.0/
©The Author(s) 2017
Subjects
Science & Technology
Life Sciences & Biomedicine
Gastroenterology & Hepatology
HOMOLOGOUS RECOMBINATION
EXCISION-REPAIR
XPC LYS939GLN
POLYMORPHISMS
RISK
SUSCEPTIBILITY
POPULATION
COMMON
XRCC1
ARG72PRO
Publication Status
Published
Article Number
e109