Investigating the structure of wild-type and HP1-bound human chromatin by cryoEM
File(s)
Author(s)
Ellins, Jessica
Type
Thesis
Abstract
In the field of chromatin biology, there are still many unknowns in regards to the true higher-order structure of chromatin. One of the main models is the ‘two-start’ model, suggesting an open zig-zag structure of parallel nucleosome stacks twists into a helical 30-nm fiber. With advancements in cryo-EM, we are in a position to solve high-resolution chromatin structures to investigate this model further. An understanding of wild-type unmodified chromatin structure is essential for elucidating the role of various chromatin regulatory proteins. Heterochromatin Protein 1 (HP1) is a major player in regulating heterochromatin formation and repressing gene expression, and is heavily implicated in disease. In this project, we utilised biochemical and structural biology techniques to elucidate structures of 12-nucleosome arrays under physiological salt conditions. Wild-type arrays demonstrated a flat structure of two parallel nucleosome stacks, with a high degree of flexibility. Addition of HP1 isoforms to nucleosome arrays revealed differences between the three human isoforms, suggesting different roles in vivo. Structural studies have suggested that HP1α promotes stabilisation of the twisted form of the 12-mer array. Overall this project has opened several exciting avenues for future studies and provided vital insight into chromatin structure at the most fundamental level.
Version
Open Access
Date Issued
2023-12
Date Awarded
2024-09
Copyright Statement
Creative Commons Attribution NonCommercial Licence
License URL
Advisor
Speck, Christian
Festenstein, Richard
Sponsor
Medical Research Council (Great Britain)
Publisher Department
Institute of Clinical Sciences
Publisher Institution
Imperial College London
Qualification Level
Doctoral
Qualification Name
Doctor of Philosophy (PhD)