A sensitive switch for visualizing natural gene silencing in single cells
File(s)REVISED - RNAi Circuit Manuscript.docx (884.96 KB)
Accepted version
Author(s)
Haynes, Karmella A
Ceroni, Francesca
Flicker, Daniel
Younger, Andrew
Silver, Pamela A
Type
Journal Article
Abstract
RNA interference is a natural gene expression silencing system that appears throughout the tree of life. As the list of cellular processes linked to RNAi grows, so does the demand for tools to accurately measure RNAi dynamics in living cells. We engineered a synthetic RNAi sensor that converts this negative regulatory signal into a positive output in living mammalian cells, thereby allowing increased sensitivity and activation. Furthermore, the circuit’s modular design allows potentially any microRNA of interest to be detected. We demonstrated that the circuit responds to an artificial microRNA and becomes activated when the RNAi target is replaced by a natural microRNA target (miR-34) in U2OS osteosarcoma cells. Our studies extend the application of rationally designed synthetic switches to RNAi, providing a sensitive way to visualize the dynamics of RNAi activity rather than just the presence of miRNA molecules.
Date Issued
2012-03-01
Date Acceptance
2012-02-01
Citation
ACS Synthetic Biology, 2012, 1 (3), pp.99-106
ISSN
2161-5063
Publisher
American Chemical Society
Start Page
99
End Page
106
Journal / Book Title
ACS Synthetic Biology
Volume
1
Issue
3
Copyright Statement
© 2012 American Chemical Society. This document is the Accepted Manuscript version of a Published Work that appeared in final form in ACS Synthetic Biology, after peer review and technical editing by the publisher. To access the final edited and published work see https://dx.doi.org/10.1021/sb3000035
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000305490200004&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
Science & Technology
Life Sciences & Biomedicine
Biochemical Research Methods
Biochemistry & Molecular Biology
genetic switch
synthetic repressor
RNA interference
miR-34
SYNTHETIC BIOLOGY
MAMMALIAN-CELLS
MICRORNAS
CANCER
EXPRESSION
TRANSCRIPTION
DROSOPHILA
PROTEINS
ELEGANS
TARGET
Publication Status
Published
Date Publish Online
2012-02-29