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  4. Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB
 
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Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB
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Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB..pdf (625.94 KB)
Published version
Author(s)
Garnett, JA
Diallo, M
Matthews, SJ
Type
Journal Article
Abstract
Pili are key cell-surface components that allow the attachment of bacteria to both biological and abiotic solid surfaces, whilst also mediating interactions between themselves. In Escherichia coli, the common pilus (Ecp) belongs to an alternative chaperone-usher (CU) pathway that plays a major role in both early biofilm formation and host-cell adhesion. The chaperone EcpB is involved in the biogenesis of the filament, which is composed of EcpA and EcpD. Initial attempts at crystallizing EcpB using natively purified protein from the bacterial periplasm were not successful; however, after the isolation of EcpB under denaturing conditions and subsequent refolding, crystals were obtained at pH 8.0 using the sitting-drop method of vapour diffusion. Diffraction data have been processed to 2.4 Å resolution. These crystals belonged to the trigonal space group P3121 or P3221, with unit-cell parameters a = b = 62.65, c = 121.14 Å and one monomer in the asymmetric unit. Molecular replacement was unsuccessful, but selenomethionine-substituted protein and heavy-atom derivatives are being prepared for phasing. The three-dimensional structure of EcpB will provide invaluable information on the subtle mechanistic differences in biogenesis between the alternative and classical CU pathways. Furthermore, this is the first time that this refolding strategy has been used to purify CU chaperones, and it could be implemented in similar systems where it has not been possible to obtain highly ordered crystals.
Date Issued
2015-06-01
Date Acceptance
2015-03-28
Citation
Acta Crystallographica Section F: Structural Biology Communications, 2015, 71 (6), pp.676-679
URI
http://hdl.handle.net/10044/1/24980
DOI
https://www.dx.doi.org/10.1107/S2053230X15006354
ISSN
2053-230X
Publisher
International Union of Crystallography
Start Page
676
End Page
679
Journal / Book Title
Acta Crystallographica Section F: Structural Biology Communications
Volume
71
Issue
6
Copyright Statement
© 2015 the Authors. The Creative Commons Attribution (CC BY) Licence applies to all articles published in Acta Crystallographica Section E and open-access articles published in other IUCr journals. Under this licence the authors retain the copyright of their article, but allow others to reuse and copy the article provided the original authors and source are cited. More information here http://journals.iucr.org/services/oa/oalicencefull.html
License URL
http://creativecommons.org/licenses/by/4.0/
Subjects
Science & Technology
Life Sciences & Biomedicine
Physical Sciences
Biochemical Research Methods
Biochemistry & Molecular Biology
Biophysics
Crystallography
pili
Ecp
Escherichia coli
DRIVES FIBER FORMATION
MOLECULAR REPLACEMENT
BIOFILM FORMATION
BIOGENESIS
Publication Status
Published
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