Experimental platform utilising melting curve technology for detection of mutations in Mycobacterium tuberculosis isolates
File(s)Broda et al Eur J Infectious Diseases 2018.pdf (403.56 KB)
Published version
Author(s)
Type
Journal Article
Abstract
Tuberculosis (TB) remains one of the most deadly infections with approximately a quarter of cases not being identified and/or treated mainly due to a lack of resources. Rapid detection of TB or drug-resistant TB enables timely adequate treatment and is a cornerstone of effective TB management. We evaluated the analytical performance of a single-tube assay for multidrug-resistant TB (MDR-TB) on an experimental platform utilising RT-PCR and melting curve analysis that could potentially be operated as a point-of-care (PoC) test in resource-constrained settings with a high burden of TB. Firstly, we developed and evaluated the prototype MDR-TB assay using specimens extracted from well-characterised TB isolates with a variety of distinct rifampicin and isoniazid resistance conferring mutations and nontuberculous Mycobacteria (NTM) strains. Secondly, we validated the experimental platform using 98 clinical sputum samples from pulmonary TB patients collected in high MDR-TB settings. The sensitivity of the platform for TB detection in clinical specimens was 75% for smear-negative and 92.6% for smear-positive sputum samples. The sensitivity of detection for rifampicin and isoniazid resistance was 88.9 and 96.0% and specificity was 87.5 and 100%, respectively. Observed limitations in sensitivity and specificity could be resolved by adjusting the sample preparation methodology and melting curve recognition algorithm. Overall technology could be considered a promising PoC methodology especially in resource-constrained settings based on its combined accuracy, convenience, simplicity, speed, and cost characteristics.
Date Issued
2018-07-01
Date Acceptance
2018-03-28
Citation
European Journal of Clinical Microbiology and Infectious Diseases, 2018, 37 (7), pp.1273-1279
ISSN
0934-9723
Publisher
Springer Verlag
Start Page
1273
End Page
1279
Journal / Book Title
European Journal of Clinical Microbiology and Infectious Diseases
Volume
37
Issue
7
Copyright Statement
© The Author(s) 2018. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
Sponsor
Innovate UK
Imperial College Trust
Identifier
https://www.ncbi.nlm.nih.gov/pubmed/29675789
PII: 10.1007/s10096-018-3246-2
Grant Number
101552
WMNF_P71650
Subjects
Drugs resistance
Melting curves
Molecular assays
Multidrug-resistant tuberculosis
Mycobacterium tuberculosis
Publication Status
Published
Coverage Spatial
Germany
Date Publish Online
2018-04-20