The mitogenome phylogeny of Adephaga (Coleoptera)
File(s)MPE_2016_72_Original_V0_main.pdf (2.74 MB)
Accepted version
Author(s)
Lopez-Lopez, A
Vogler, AP
Type
Journal Article
Abstract
The beetle suborder Adephaga consists of several aquatic (‘Hydradephaga’) and terrestrial (‘Geadephaga’) families whose relationships remain poorly known. In particular, the position of Cicindelidae (tiger beetles) appears problematic, as recent studies have found them either within the Hydradephaga based on mitogenomes, or together with several unlikely relatives in Geadephaga based on 18S rRNA genes. We newly sequenced nine mitogenomes of representatives of Cicindelidae and three ground beetles (Carabidae), and conducted phylogenetic analyses together with 29 existing mitogenomes of Adephaga. Our results support a basal split of Geadephaga and Hydradephaga, and reveal Cicindelidae, together with Trachypachidae, as sister to all other Geadephaga, supporting their status as Family. We show that alternative arrangements of basal adephagan relationships coincide with increased rates of evolutionary change and with nucleotide compositional bias, but these confounding factors were overcome by the CAT-Poisson model of PhyloBayes. The mitogenome + 18S rRNA combined matrix supports the same topology only after removal of the hypervariable expansion segments. Densely sampled mitogenomes, analyzed with site heterogeneous mixture models, support a plausible hypothesis of basal relationships in the Adephaga.
Date Issued
2017-06-21
Date Acceptance
2017-06-08
Citation
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 114, pp.166-174
ISSN
1055-7903
Publisher
ACADEMIC PRESS INC ELSEVIER SCIENCE
Start Page
166
End Page
174
Journal / Book Title
MOLECULAR PHYLOGENETICS AND EVOLUTION
Volume
114
Copyright Statement
© 2017 Elsevier Inc. All rights reserved. This manuscript is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000407307000014&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
Science & Technology
Life Sciences & Biomedicine
Biochemistry & Molecular Biology
Evolutionary Biology
Genetics & Heredity
Geadephaga
Hydradephaga
Cicindelidae
PhyloBayes
Rate heterogeneity
18S rRNA
MITOCHONDRIAL GENOMES
SEQUENCE DATA
COMPOSITIONAL HETEROGENEITY
COMPREHENSIVE ANALYSIS
SYSTEMATIC POSITION
MERUIDAE COLEOPTERA
RIBOSOMAL-RNA
BEETLES
CARABIDAE
MORPHOLOGY
0604 Genetics
0603 Evolutionary Biology
0608 Zoology
Publication Status
Published