This paper presents methods of including coordinate transformations into the solution of the incompressible Navier–Stokes equations using the velocity-correction scheme, which is commonly used in the numerical solution of unsteady incompressible flows. This is important when the transformation leads to symmetries that allow the use of more efficient numerical techniques, like employing a Fourier expansion to discretize a homogeneous direction. Two different approaches are presented: in the first approach all the influence of the mapping is treated explicitly, while in the second the mapping terms related to convection are treated explicitly, with the pressure and viscous terms treated implicitly. Through numerical results, we demonstrate how these methods maintain the accuracy of the underlying high-order method, and further apply the discretisation strategy to problems where mixed Fourier-spectral/hp element discretisations can be applied, thereby extending the usefulness of this discretisation technique.