PAT-CNN: automatic segmentation and quantification of pericardial adipose tissue from t2-weighted cardiac magnetic resonance images
File(s)2211.04995v1.pdf (2.77 MB)
Accepted version
Author(s)
Li, Zhuoyu
Petri, Camille
Howard, James
Cole, Graham
Varela, Marta
Type
Conference Paper
Abstract
Background: Increased pericardial adipose tissue (PAT) is associated with many types of cardiovascular disease (CVD). Although cardiac magnetic resonance images (CMRI) are often acquired in patients with CVD, there are currently no tools to automatically identify and quantify PAT from CMRI. The aim of this study was to create a neural network to segment PAT from T2-weighted CMRI and explore the correlations between PAT volumes (PATV) and CVD outcomes and mortality.
Methods: We trained and tested a deep learning model, PAT-CNN, to segment PAT on T2-weighted cardiac MR images. Using the segmentations from PAT-CNN, we automatically calculated PATV on images from 391 patients. We analysed correlations between PATV and CVD diagnosis and 1-year mortality post-imaging.
Results: PAT-CNN was able to accurately segment PAT with Dice score/ Hausdorff distances of 0.74 ± 0.03/27.1 ± 10.9 mm, similar to the values obtained when comparing the segmentations of two independent human observers (0.76 ± 0.06/21.2 ± 10.3 mm). Regression models showed that, independently of sex and body-mass index, PATV is significantly positively correlated with a diagnosis of CVD and with 1-year all cause mortality (p-value < 0.01).
Conclusions: PAT-CNN can segment PAT from T2-weighted CMR images automatically and accurately. Increased PATV as measured automatically from CMRI is significantly associated with the presence of CVD and can independently predict 1-year mortality.
Methods: We trained and tested a deep learning model, PAT-CNN, to segment PAT on T2-weighted cardiac MR images. Using the segmentations from PAT-CNN, we automatically calculated PATV on images from 391 patients. We analysed correlations between PATV and CVD diagnosis and 1-year mortality post-imaging.
Results: PAT-CNN was able to accurately segment PAT with Dice score/ Hausdorff distances of 0.74 ± 0.03/27.1 ± 10.9 mm, similar to the values obtained when comparing the segmentations of two independent human observers (0.76 ± 0.06/21.2 ± 10.3 mm). Regression models showed that, independently of sex and body-mass index, PATV is significantly positively correlated with a diagnosis of CVD and with 1-year all cause mortality (p-value < 0.01).
Conclusions: PAT-CNN can segment PAT from T2-weighted CMR images automatically and accurately. Increased PATV as measured automatically from CMRI is significantly associated with the presence of CVD and can independently predict 1-year mortality.
Date Issued
2022
Date Acceptance
2023-08-05
Citation
STACOM 2022: Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers, 2022, 13593, pp.359-368
ISBN
9783031234422
ISSN
0302-9743
Publisher
Springer Nature Switzerland
Start Page
359
End Page
368
Journal / Book Title
STACOM 2022: Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers
Volume
13593
Copyright Statement
This version of the contribution has been accepted for publication, after peer review (when applicable) but is not the Version of Record and does not reflect post-acceptance improvements, or any corrections. The Version of Record is available online at: https://doi.org/10.1007/978-3-031-23443-9_33. Use of this Accepted Version is subject to the publisher’s Accepted Manuscript terms of use https://www.springernature.com/gp/open-research/policies/accepted-manuscript-terms
Identifier
https://link.springer.com/chapter/10.1007/978-3-031-23443-9_33
Source
Statistical Atlases and Computational Modeling of the Heart (STACOM)
Publication Status
Published
Start Date
2022-09-18
Coverage Spatial
Singapore
Date Publish Online
2023-01-28