A closed-loop optogenetic platform
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Published version
Author(s)
Type
Journal Article
Abstract
Neuromodulation is an established treatment for numerous neurological conditions, but to expand the therapeutic scope there is a need to improve the spatial, temporal and cell-type specificity of stimulation. Optogenetics is a promising area of current research, enabling optical stimulation of genetically-defined cell types without interfering with concurrent electrical recording for closed-loop control of neural activity. We are developing an open-source system to provide a platform for closed-loop optogenetic neuromodulation, incorporating custom integrated circuitry for recording and stimulation, real-time closed-loop algorithms running on a microcontroller and experimental control via a PC interface. We include commercial components to validate performance, with the ultimate aim of translating this approach to humans. In the meantime our system is flexible and expandable for use in a variety of preclinical neuroscientific applications. The platform consists of a Controlling Abnormal Network Dynamics using Optogenetics (CANDO) Control System (CS) that interfaces with up to four CANDO headstages responsible for electrical recording and optical stimulation through custom CANDO LED optrodes. Control of the hardware, inbuilt algorithms and data acquisition is enabled via the CANDO GUI (Graphical User Interface). Here we describe the design and implementation of this system, and demonstrate how it can be used to modulate neuronal oscillations in vitro and in vivo.
Date Issued
2021-09-10
Date Acceptance
2021-08-16
Citation
Frontiers in Neuroscience, 2021, 15, pp.1-10
ISSN
1662-453X
Publisher
Frontiers Media
Start Page
1
End Page
10
Journal / Book Title
Frontiers in Neuroscience
Volume
15
Copyright Statement
© 2021 Firfilionis, Hutchings, Tamadoni, Walsh, Turnbull, Escobedo-Cousin, Bailey, Gausden, Patel, Haci, Liu, LeBeau, Trevelyan, Constandinou, O'Neill, Kaiser, Degenaar and Jackson. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
License URL
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000698798700001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
Science & Technology
Life Sciences & Biomedicine
Neurosciences
Neurosciences & Neurology
optogenetics
closed-loop
neuromodulation
electrophysiology
open-source
BRAIN
BCI
Publication Status
Published
Article Number
ARTN 718311
Date Publish Online
2021-09-10