Phage-host co-evolution has led to distinct generalized transduction strategies
File(s)gkae489.pdf (1.39 MB)
Published version
Author(s)
Type
Journal Article
Abstract
Generalized transduction is pivotal in bacterial evolution but lacks comprehensive understanding regarding the facilitating features and variations among phages. We addressed this gap by sequencing and comparing the transducing particle content of three different Salmonella Typhimurium phages (i.e. Det7, ES18 and P22) that share a headful packaging mechanism that is typically initiated from a cognate pac site within the phage chromosome. This revealed substantial disparities in both the extent and content of transducing particles among these phages. While Det7 outperformed ES18 in terms of relative number of transducing particles, both phages contrasted with P22 in terms of content. In fact, we found evidence for the presence of conserved P22 pac-like sequences in the host chromosome that direct tremendously increased packaging and transduction frequencies of downstream regions by P22. More specifically, a ca. 561 kb host region between oppositely oriented pac-like sequences in the purF and minE loci was identified as highly packaged and transduced during both P22 prophage induction and lytic infection. Our findings underscore the evolution of phage transducing capacity towards attenuation, promiscuity or directionality, and suggest that pac-like sequences in the host chromosome could become selected as sites directing high frequency of transduction.
Date Issued
2024-07-22
Date Acceptance
2024-05-30
Citation
Nucleic Acids Research, 2024, 52 (13), pp.7780-7791
ISSN
0305-1048
Publisher
Oxford University Press
Start Page
7780
End Page
7791
Journal / Book Title
Nucleic Acids Research
Volume
52
Issue
13
Copyright Statement
© The Author(s) 2024. Published by Oxford University Press on behalf of Nucleic Acids Research.
This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
License URL
Identifier
https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkae489/7694279
Subjects
BACTERIOPHAGE-P22
Biochemistry & Molecular Biology
CHROMOSOME
DNA
ESCHERICHIA-COLI
GENES
INITIATION
Life Sciences & Biomedicine
PAC
Science & Technology
SEQUENCE
TYPHIMURIUM
Publication Status
Published
Article Number
gkae489
Date Publish Online
2024-06-17