Structural basis of transcription inhibition by the DNA mimic protein Ocr of bacteriophage T7.
Author(s)
Type
Journal Article
Abstract
Bacteriophage T7 infects Escherichia coli and evades the host restriction/modification system. The Ocr protein of T7 was shown to exist as a dimer mimicking DNA and to bind to host restriction enzymes, thus preventing the degradation of the viral genome by the host. Here we report that Ocr can also inhibit host transcription by directly binding to bacterial RNA polymerase (RNAP) and competing with the recruitment of RNAP by sigma factors. Using cryo electron microscopy, we determined the structures of Ocr bound to RNAP. The structures show that an Ocr dimer binds to RNAP in the cleft, where key regions of sigma bind and where DNA resides during transcription synthesis, thus providing a structural basis for the transcription inhibition. Our results reveal the versatility of Ocr in interfering with host systems and suggest possible strategies that could be exploited in adopting DNA mimicry as a basis for forming novel antibiotics.
Date Issued
2020-02-10
Date Acceptance
2020-02-01
Citation
eLife, 2020, 9
ISSN
2050-084X
Publisher
eLife Sciences Publications Ltd
Journal / Book Title
eLife
Volume
9
Copyright Statement
© 2020 eLife Sciences Publications Ltd. Subject to a Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/), except where otherwise noted.
Sponsor
Biotechnology and Biological Sciences Research Council (BBSRC)
Medical Research Council (MRC)
Medical Research Council (MRC)
Identifier
https://elifesciences.org/articles/52125
Grant Number
BB/N007816/1
MR/N006828/1
N/A
Subjects
Science & Technology
Life Sciences & Biomedicine
Biology
Life Sciences & Biomedicine - Other Topics
COLI RNA-POLYMERASE
ESCHERICHIA-COLI
CRYO-EM
BACTERIAL TRANSCRIPTION
GENE 0.3
INITIATION
REFINEMENT
COMPLEXES
MECHANISM
REVEAL
DNA mimicry proteins
E. coli
Ocr
RNAP
bacteriophage
cryo EM
molecular biophysics
structural biology
transcription
0601 Biochemistry and Cell Biology
Publication Status
Published
Date Publish Online
2020-02-10