Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
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Author(s)
Type
Journal Article
Abstract
Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting
future progression based on a number of observed biomarker values is of great interest
for patients, clinicians and researchers alike. In this work, an approach for disease progress
estimation is presented. Based on a set of subjects that convert to a more severe disease
stage during the study, models that describe typical trajectories of biomarker values in the
course of disease are learned using quantile regression. A novel probabilistic method is
then derived to estimate the current disease progress as well as the rate of progression of
an individual by fitting acquired biomarkers to the models. A particular strength of the
method is its ability to naturally handle missing data. This means, it is applicable even if individual
biomarker measurements are missing for a subject without requiring a retraining of
the model. The functionality of the presented method is demonstrated using synthetic and
—employing cognitive scores and image-based biomarkers—real data from the ADNI
study. Further, three possible applications for progress estimation are demonstrated to
underline the versatility of the approach: classification, construction of a spatio-temporal disease
progression atlas and prediction of future disease progression.
future progression based on a number of observed biomarker values is of great interest
for patients, clinicians and researchers alike. In this work, an approach for disease progress
estimation is presented. Based on a set of subjects that convert to a more severe disease
stage during the study, models that describe typical trajectories of biomarker values in the
course of disease are learned using quantile regression. A novel probabilistic method is
then derived to estimate the current disease progress as well as the rate of progression of
an individual by fitting acquired biomarkers to the models. A particular strength of the
method is its ability to naturally handle missing data. This means, it is applicable even if individual
biomarker measurements are missing for a subject without requiring a retraining of
the model. The functionality of the presented method is demonstrated using synthetic and
—employing cognitive scores and image-based biomarkers—real data from the ADNI
study. Further, three possible applications for progress estimation are demonstrated to
underline the versatility of the approach: classification, construction of a spatio-temporal disease
progression atlas and prediction of future disease progression.
Date Issued
2016-04-20
Date Acceptance
2016-03-22
Citation
PLOS One, 2016, 11 (4)
ISSN
1932-6203
Publisher
Public Library of Science
Journal / Book Title
PLOS One
Volume
11
Issue
4
Copyright Statement
© 2016 Schmidt-Richberg et al. This is
an open access article distributed under the terms of
the Creative Commons Attribution License, which
permits unrestricted use, distribution, and
reproduction in any medium, provided the original
author and source are credited.
an open access article distributed under the terms of
the Creative Commons Attribution License, which
permits unrestricted use, distribution, and
reproduction in any medium, provided the original
author and source are credited.
License URL
Subjects
General Science & Technology
MD Multidisciplinary
Article Number
e0153040