Coupled dictionary learning for multi-contrast MRI reconstruction
File(s)song2019coupled,CDLMRI,TMI.2019.2932961.pdf (4.09 MB) song2019coupled,CDLMRI,TMI.2019.2932961_supplementary.pdf (12.27 MB)
Accepted version
Supporting information
Author(s)
Song, Pingfan
Weizman, Lior
Mota, Joao FC
Eldar, Yonina C
Rodrigues, Miguel RD
Type
Journal Article
Abstract
Magnetic resonance (MR) imaging tasks often involve multiple contrasts, such as T1-weighted, T2-weighted and Fluid-attenuated inversion recovery (FLAIR) data. These contrasts capture information associated with the same underlying anatomy and thus exhibit similarities in either structure level or gray level. In this paper, we propose a Coupled Dictionary Learning based multi-contrast MRI reconstruction (CDLMRI) approach to leverage the dependency correlation between different contrasts for guided or joint reconstruction from their under-sampled k-space data. Our approach iterates between three stages: coupled dictionary learning, coupled sparse denoising, and enforcing k-space consistency. The first stage learns a set of dictionaries that not only are adaptive to the contrasts, but also capture correlations among multiple contrasts in a sparse transform domain. By capitalizing on the learned dictionaries, the second stage performs coupled sparse coding to remove the aliasing and noise in the corrupted contrasts. The third stage enforces consistency between the denoised contrasts and the measurements in the k-space domain. Numerical experiments, consisting of retrospective under-sampling of various MRI contrasts with a variety of sampling schemes, demonstrate that CDLMRI is capable of capturing structural dependencies between different contrasts. The learned priors indicate notable advantages in multi-contrast MR imaging and promising applications in quantitative MR imaging such as MR fingerprinting.
Date Issued
2019-08-02
Date Acceptance
2019-07-29
Citation
IEEE Transactions on Medical Imaging, 2019, 39 (3), pp.621-633
ISSN
0278-0062
Publisher
Institute of Electrical and Electronics Engineers (IEEE)
Start Page
621
End Page
633
Journal / Book Title
IEEE Transactions on Medical Imaging
Volume
39
Issue
3
Copyright Statement
© 2019 IEEE. Personal use of this material is permitted. However, permission to use this material for any other
purposes must be obtained from the IEEE by sending a request to pubs-permissions@ieee.org. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
purposes must be obtained from the IEEE by sending a request to pubs-permissions@ieee.org. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
Identifier
https://ieeexplore.ieee.org/document/8786180
Subjects
08 Information and Computing Sciences
09 Engineering
Nuclear Medicine & Medical Imaging
Publication Status
Published online
Date Publish Online
2019-08-02