Transcriptional profiling identifies the lncRNA PVT1 as a novel rewgulator of the asthmatic phenotype in human airway smooth muscle
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Author(s)
Type
Journal Article
Abstract
Background: The mechanism underlying non-severe and severe
asthma remains unclear although it is commonly associated with increased
airway smooth muscle (ASM) mass. Long non-coding RNAs (lncRNAs) are known
to be important in regulating healthy primary ASM cells whilst changed
expression has been observed in CD8 T-cells from patients with severe
asthma.
Methods: Primary ASM cells were isolated from healthy individuals (n=9),
patients classified as having non-severe asthma (n=9) or severe asthma
(n=9). ASM cells were exposed to dexamethasone and fetal calf serum
(FCS). mRNA and lncRNA expression was measured by microarray and
quantitative real-time PCR. Bioinformatic analysis was used to examine
for relevant biological pathways. Finally, the lncRNA; Plasmacytoma
Variant Translocation (PVT1) was inhibited by transfection of primary ASM
cells with siRNAs, and the effect upon ASM cell phenotype was examined.
Results: The mRNA expression profile was significantly different between
patient groups following exposure to dexamethasone and FCS and these were
associated with biological pathways that may be relevant to the
pathogenesis of asthma including cellular proliferation and pathways
associated with glucocorticoid activity. We also observed a significant
change in the expression of lncRNAs, yet only one (PVT1) is decreased in
expression in the corticosteroid sensitive non-severe asthmatics, and
increased in expression in the corticosteroid-insensitive severe
asthmatics. Subsequent targeting studies demonstrated the importance of
this lncRNA in controlling both proliferation and IL-6 release in ASM
cells from patients with severe asthma.
Conclusions: lncRNAs are associated with the aberrant phenotype observed
in ASM cells from patients with asthma. Targeting of PVT1 may be
effective in reducing airway remodelling in asthma.
asthma remains unclear although it is commonly associated with increased
airway smooth muscle (ASM) mass. Long non-coding RNAs (lncRNAs) are known
to be important in regulating healthy primary ASM cells whilst changed
expression has been observed in CD8 T-cells from patients with severe
asthma.
Methods: Primary ASM cells were isolated from healthy individuals (n=9),
patients classified as having non-severe asthma (n=9) or severe asthma
(n=9). ASM cells were exposed to dexamethasone and fetal calf serum
(FCS). mRNA and lncRNA expression was measured by microarray and
quantitative real-time PCR. Bioinformatic analysis was used to examine
for relevant biological pathways. Finally, the lncRNA; Plasmacytoma
Variant Translocation (PVT1) was inhibited by transfection of primary ASM
cells with siRNAs, and the effect upon ASM cell phenotype was examined.
Results: The mRNA expression profile was significantly different between
patient groups following exposure to dexamethasone and FCS and these were
associated with biological pathways that may be relevant to the
pathogenesis of asthma including cellular proliferation and pathways
associated with glucocorticoid activity. We also observed a significant
change in the expression of lncRNAs, yet only one (PVT1) is decreased in
expression in the corticosteroid sensitive non-severe asthmatics, and
increased in expression in the corticosteroid-insensitive severe
asthmatics. Subsequent targeting studies demonstrated the importance of
this lncRNA in controlling both proliferation and IL-6 release in ASM
cells from patients with severe asthma.
Conclusions: lncRNAs are associated with the aberrant phenotype observed
in ASM cells from patients with asthma. Targeting of PVT1 may be
effective in reducing airway remodelling in asthma.
Date Issued
2016-07-02
Date Acceptance
2016-06-13
Citation
Journal of Allergy and Clinical Immunology, 2016, 139 (3), pp.780-789
ISSN
1097-6825
Publisher
Elsevier
Start Page
780
End Page
789
Journal / Book Title
Journal of Allergy and Clinical Immunology
Volume
139
Issue
3
Copyright Statement
© 2016 The Authors. Published by Elsevier Inc. on behalf of the American Academy
of Allergy, Asthma & Immunology. This is an open access article under the CC BY
license (http://creativecommons.org/licenses/by/4.0/).
of Allergy, Asthma & Immunology. This is an open access article under the CC BY
license (http://creativecommons.org/licenses/by/4.0/).
Sponsor
Wellcome Trust
Medical Research Council (MRC)
Medical Research Council (MRC)
National Institute for Health Research
Grant Number
083905/Z/07/Z
G1000758
G1000758
NF-SI-0515-10016
Subjects
Science & Technology
Life Sciences & Biomedicine
Allergy
Immunology
Asthma
airway smooth muscle
proliferation
IL-6
transcriptome
long noncoding RNA
PVT1
CELL LUNG-CANCER
BREAST-CANCER
INFLAMMATION
EXPRESSION
PROTEIN
AMPLIFICATION
TARGET
GENES
PROLIFERATION
ASSOCIATION
Adult
Female
Humans
Interleukin-6
Male
Middle Aged
Myocytes, Smooth Muscle
Oligonucleotide Array Sequence Analysis
Phenotype
Proto-Oncogene Proteins c-myc
RNA, Long Noncoding
RNA, Messenger
RNA, Small Interfering
Transcription, Genetic
Transcriptome
Young Adult
1107 Immunology
Publication Status
Published