Conducting metagenomic studies in microbiology and clinical research
File(s)Martin2018_Article_ConductingMetagenomicStudiesIn.pdf (871.26 KB)
Published version
Author(s)
Martin, Tiphaine C
Visconti, Alessia
Spector, Tim D
Falchi, Mario
Type
Journal Article
Abstract
Owing to the increased cost-effectiveness of high-throughput technologies, the number of studies focusing on the human microbiome and its connections to human health and disease has recently surged. However, best practices in microbiology and clinical research have yet to be clearly established. Here, we present an overview of the challenges and opportunities involved in conducting a metagenomic study, with a particular focus on data processing and analytical methods.
Date Issued
2018-10-01
Date Acceptance
2018-06-28
Citation
Applied Microbiology and Biotechnology, 2018, 102 (20), pp.8629-8646
ISSN
0175-7598
Publisher
Springer (part of Springer Nature)
Start Page
8629
End Page
8646
Journal / Book Title
Applied Microbiology and Biotechnology
Volume
102
Issue
20
Copyright Statement
© The Author(s) 2018. This article is distributed under the terms of the Creative
Commons Attribution 4.0 International License (http://creativecommons.
org/licenses/by/4.0/), which permits unrestricted use, distribution, and
reproduction in any medium, provided you give appropriate credit to
the original author(s) and the source, provide a link to the Creative
Commons license, and indicate if changes were made.
Commons Attribution 4.0 International License (http://creativecommons.
org/licenses/by/4.0/), which permits unrestricted use, distribution, and
reproduction in any medium, provided you give appropriate credit to
the original author(s) and the source, provide a link to the Creative
Commons license, and indicate if changes were made.
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000445604600003&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
Science & Technology
Life Sciences & Biomedicine
Biotechnology & Applied Microbiology
Metagenomics
Human microbiome
Microbiology and clinical research
Next generation sequencing
HUMAN GUT MICROBIOME
INTESTINAL MICROBIOTA
QUALITY-CONTROL
ZIKA VIRUS
ANTIBIOTIC-RESISTANCE
STORAGE-CONDITIONS
FECAL MICROBIOTA
GENE-EXPRESSION
REAL-TIME
GENOMES
Publication Status
Published
Date Publish Online
2018-08-04