Homological scaffolds of brain functional networks
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Author(s)
Type
Journal Article
Abstract
Networks, as efficient representations of complex systems, have appealed to
scientists for a long time and now permeate many areas of science, including
neuroimaging (Bullmore and Sporns 2009 Nat. Rev. Neurosci. 10, 186–198.
(doi:10.1038/nrn2618)). Traditionally, the structure of complex networks has
been studied through their statistical properties and metrics concerned with
node and link properties, e.g. degree-distribution, node centrality and modularity.
Here, we study the characteristics of functional brain networks at the
mesoscopic level from a novel perspective that highlights the role of inhomogeneities
in the fabric of functional connections. This can be done by focusing
on the features of a set of topological objects—homological cycles—associated
with the weighted functional network. We leverage the detected topological
information to define the homological scaffolds, a new set of objects designed to
represent compactly the homological features of the correlation network and
simultaneously make their homological properties amenable to networks theoretical
methods. As a proof of principle, we apply these tools to compare restingstate
functional brain activity in 15 healthy volunteers after intravenous infusion
of placebo and psilocybin—the main psychoactive component of magic mushrooms.
The results show that the homological structure of the brain’s functional
patterns undergoes a dramatic change post-psilocybin, characterized by the
appearance of many transient structures of low stability and of a small
number of persistent ones that are not observed in the case of placebo.
scientists for a long time and now permeate many areas of science, including
neuroimaging (Bullmore and Sporns 2009 Nat. Rev. Neurosci. 10, 186–198.
(doi:10.1038/nrn2618)). Traditionally, the structure of complex networks has
been studied through their statistical properties and metrics concerned with
node and link properties, e.g. degree-distribution, node centrality and modularity.
Here, we study the characteristics of functional brain networks at the
mesoscopic level from a novel perspective that highlights the role of inhomogeneities
in the fabric of functional connections. This can be done by focusing
on the features of a set of topological objects—homological cycles—associated
with the weighted functional network. We leverage the detected topological
information to define the homological scaffolds, a new set of objects designed to
represent compactly the homological features of the correlation network and
simultaneously make their homological properties amenable to networks theoretical
methods. As a proof of principle, we apply these tools to compare restingstate
functional brain activity in 15 healthy volunteers after intravenous infusion
of placebo and psilocybin—the main psychoactive component of magic mushrooms.
The results show that the homological structure of the brain’s functional
patterns undergoes a dramatic change post-psilocybin, characterized by the
appearance of many transient structures of low stability and of a small
number of persistent ones that are not observed in the case of placebo.
Date Issued
2014-12-06
Date Acceptance
2014-10-03
Citation
Journal of the Royal Society Interface, 2014, 11 (101)
ISSN
1742-5689
Publisher
Royal Society, The
Journal / Book Title
Journal of the Royal Society Interface
Volume
11
Issue
101
Copyright Statement
© 2014 The Authors. Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
Subjects
Science & Technology
Multidisciplinary Sciences
Science & Technology - Other Topics
brain functional networks
fMRI
persistent homology
psilocybin
GRAPH-THEORETICAL ANALYSIS
PERSISTENT HOMOLOGY
CONNECTIVITY
TOPOLOGY
STATE
CENTRALITY
PSILOCYBIN
FMRI
HUBS
Publication Status
Published
Article Number
20140873