Abdominal aortic aneurysm segmentation with a small number of training subjects
File(s)1804.02943v1.pdf (569.29 KB)
Working paper
Author(s)
Zheng, Jian-Qing
Zhou, Xiao-Yun
Li, Qing-Biao
Riga, Celia
Yang, Guang-Zhong
Type
Working Paper
Abstract
Pre-operative Abdominal Aortic Aneurysm (AAA) 3D shape is critical for
customized stent-graft design in Fenestrated Endovascular Aortic Repair
(FEVAR). Traditional segmentation approaches implement expert-designed feature
extractors while recent deep neural networks extract features automatically
with multiple non-linear modules. Usually, a large training dataset is
essential for applying deep learning on AAA segmentation. In this paper, the
AAA was segmented using U-net with a small number (two) of training subjects.
Firstly, Computed Tomography Angiography (CTA) slices were augmented with gray
value variation and translation to avoid the overfitting caused by the small
number of training subjects. Then, U-net was trained to segment the AAA. Dice
Similarity Coefficients (DSCs) over 0.8 were achieved on the testing subjects.
The PLZ, DLZ and aortic branches are all reconstructed reasonably, which will
facilitate stent graft customization and help shape instantiation for
intra-operative surgery navigation in FEVAR.
customized stent-graft design in Fenestrated Endovascular Aortic Repair
(FEVAR). Traditional segmentation approaches implement expert-designed feature
extractors while recent deep neural networks extract features automatically
with multiple non-linear modules. Usually, a large training dataset is
essential for applying deep learning on AAA segmentation. In this paper, the
AAA was segmented using U-net with a small number (two) of training subjects.
Firstly, Computed Tomography Angiography (CTA) slices were augmented with gray
value variation and translation to avoid the overfitting caused by the small
number of training subjects. Then, U-net was trained to segment the AAA. Dice
Similarity Coefficients (DSCs) over 0.8 were achieved on the testing subjects.
The PLZ, DLZ and aortic branches are all reconstructed reasonably, which will
facilitate stent graft customization and help shape instantiation for
intra-operative surgery navigation in FEVAR.
Date Issued
2018-04-09
Citation
2018
Publisher
arXiv
Copyright Statement
© 2018 Author(s).
Sponsor
Imperial College Healthcare NHS Trust- BRC Funding
Imperial College Healthcare NHS Trust- BRC Funding
Engineering & Physical Science Research Council (EPSRC)
Identifier
http://arxiv.org/abs/1804.02943v1
Grant Number
RDB04 79560
RD207
EP/N024877/1
Subjects
cs.CV
cs.CV
Notes
2 pages, 2 figures
Publication Status
Published