Inferring causal relationships between risk factors and outcomes from genome-wide association study data
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Published version
Author(s)
Burgess, Stephen
Foley, Christopher N
Zuber, Verena
Type
Journal Article
Abstract
An observational correlation between a suspected risk factor and an outcome does not necessarily imply that interventions on levels of the risk factor will have a causal impact on the outcome (correlation is not causation). If genetic variants associated with the risk factor are also associated with the outcome, then this increases the plausibility that the risk factor is a causal determinant of the outcome. However, if the genetic variants in the analysis do not have a specific biological link to the risk factor, then causal claims can be spurious. We review the Mendelian randomization paradigm for making causal inferences using genetic variants. We consider monogenic analysis, in which genetic variants are taken from a single gene region, and polygenic analysis, which includes variants from multiple regions. We focus on answering two questions: When can Mendelian randomization be used to make reliable causal inferences, and when can it be used to make relevant causal inferences?
Editor(s)
Chakravarti, A
Green, ED
Date Issued
2018-08
Date Acceptance
2018-04-01
Citation
Annual Review of Genomics and Human Genetics, 2018, 19 (1), pp.303-327
ISSN
1527-8204
Publisher
Annual Reviews
Start Page
303
End Page
327
Journal / Book Title
Annual Review of Genomics and Human Genetics
Volume
19
Issue
1
Copyright Statement
© 2018 Stephen Burgess et al. This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. See credit lines of images or other third-party material in this article for license information.
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000443936800014&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
Science & Technology
Life Sciences & Biomedicine
Genetics & Heredity
genetic epidemiology
causal inference
instrumental variable
target validation
drug discovery
MENDELIAN RANDOMIZATION ANALYSIS
CORONARY-HEART-DISEASE
MULTIPLE GENETIC-VARIANTS
INSTRUMENTAL VARIABLES
SUMMARIZED DATA
INTERLEUKIN-6 RECEPTOR
EGGER REGRESSION
METAANALYSIS
BIAS
TRAITS
Publication Status
Published
Date Publish Online
2018-04-25