Brian: a simulator for spiking neural networks in python
File(s)
Author(s)
Goodman, D
Brette, R
Type
Journal Article
Abstract
"Brian" is a new simulator for spiking neural networks, written in Python (http://brian. di.ens.fr). It is an intuitive and highly flexible tool for rapidly developing new models, especially networks of single-compartment neurons. In addition to using standard types of neuron models, users can define models by writing arbitrary differential equations in ordinary mathematical notation. Python scientific libraries can also be used for defining models and analysing data. Vectorisation techniques allow efficient simulations despite the overheads of an interpreted language. Brian will be especially valuable for working on non-standard neuron models not easily covered by existing software, and as an alternative to using Matlab or C for simulations. With its easy and intuitive syntax, Brian is also very well suited for teaching computational neuroscience.
Date Issued
2008-11-18
Date Acceptance
2008-10-26
Citation
Frontiers in Neuroinformatics, 2008, 2
ISSN
1662-5196
Publisher
Frontiers Media
Journal / Book Title
Frontiers in Neuroinformatics
Volume
2
Copyright Statement
© 2008 Goodman and Brette. This is an open-access article subject to an exclusive license agreement between the authors and the Frontiers Research Foundation, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited.
Subjects
Python
computational neuroscience
integrate and fire
neural networks
simulation
software
spiking neurons
teaching
Publication Status
Published
Article Number
5