Evolution of a selfish genetic element: the 2 micron plasmid of saccharomyces spp.
Author(s)
Harrison, Eleanor
Type
Thesis or dissertation
Abstract
The 2 Micron plasmid is a multicopy DNA circle inhabiting the genome of the budding
yeasts, Sacchormyces spp. The plasmid confers no known benefits to the host, but
imposes a small fitness cost. However the plasmid is able to drive, i.e. to transmit to >50%
of sexual offspring, which allows the element to spread through an outcrossing host
population. Therefore we can consider the plasmid a selfish genetic element of yeast.
Here we draw on a number of approaches to improve our understanding of this element.
Firstly, we examined the relationship between the cost of plasmid carriage and copy number
by experimentally manipulating the number of plasmids in the host. We find that host fitness
decreases at a rate of ~0.09% per additional plasmid. Secondly we use experimentally
evolving yeast populations to test the hypothesis that sexual reproduction, which is
fundamental to the evolution of selfish genetic elements, will drive increasing virulence in the
plasmid. We find that 2 Micron copy number increased in outcrossing populations but
remained constant in asexual populations. We also find that sex allowed the invasion of
non-functional mitochondria in to the populations, showing that sex has the capacity to
generate a driving selfish genetic element from one of the most fundamental endosymbionts
of the eukaryotic cell.
In addition, we have investigated plasmid variation from global populations of
Saccharromyces spp. in order to better understand the population biology and evolution of
this plasmid. Here we find evidence that the plasmid is able to move between species,
recombine with other plasmids within the cell, and exist at a surprisingly wide range of copy
numbers in different host populations. Understanding the population structure and evolution
of this element allows us to view the plasmid as an autonomous unit evolving in its own right
in the genomes of its hosts.
yeasts, Sacchormyces spp. The plasmid confers no known benefits to the host, but
imposes a small fitness cost. However the plasmid is able to drive, i.e. to transmit to >50%
of sexual offspring, which allows the element to spread through an outcrossing host
population. Therefore we can consider the plasmid a selfish genetic element of yeast.
Here we draw on a number of approaches to improve our understanding of this element.
Firstly, we examined the relationship between the cost of plasmid carriage and copy number
by experimentally manipulating the number of plasmids in the host. We find that host fitness
decreases at a rate of ~0.09% per additional plasmid. Secondly we use experimentally
evolving yeast populations to test the hypothesis that sexual reproduction, which is
fundamental to the evolution of selfish genetic elements, will drive increasing virulence in the
plasmid. We find that 2 Micron copy number increased in outcrossing populations but
remained constant in asexual populations. We also find that sex allowed the invasion of
non-functional mitochondria in to the populations, showing that sex has the capacity to
generate a driving selfish genetic element from one of the most fundamental endosymbionts
of the eukaryotic cell.
In addition, we have investigated plasmid variation from global populations of
Saccharromyces spp. in order to better understand the population biology and evolution of
this plasmid. Here we find evidence that the plasmid is able to move between species,
recombine with other plasmids within the cell, and exist at a surprisingly wide range of copy
numbers in different host populations. Understanding the population structure and evolution
of this element allows us to view the plasmid as an autonomous unit evolving in its own right
in the genomes of its hosts.
Date Issued
2010-07
Date Awarded
2010-10
Advisor
Burt, Austin
Koufopanou, Vassiliki
Creator
Harrison, Eleanor
Publisher Department
Biology
Publisher Institution
Imperial College London
Qualification Level
Doctoral
Qualification Name
Doctor of Philosophy (PhD)