The Geobacillus plasmid set: a modular toolkit for thermophile engineering
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Published version
Author(s)
Reeve, B
Martinez Klimova, E
de Jonghe, J
Leak, DJ
Ellis, T
Type
Journal Article
Abstract
Geobacillus thermoglucosidasius is a
gram-positive thermophile of industrial interest that
exhibits rapid growth and can utilize a variety of
plant-derived feedstocks. It is an attractive chassis
organism for high temperature biotechnology and
synthetic biology applications but is currently limited
by a lack of available genetic tools. Here we describe
a set of modular shuttle vectors, including a
promoter library and reporter proteins. The compact
plasmids are composed of interchangeable modules
for molecular cloning in Escherichia coli and stable
propagation in G. thermoglucosidasius and other
Geobacillus species. Modules include two origins of
replication, two selectable markers and three reporter
proteins for characterization of gene expression.
For fine-tuning heterologous expression from these
plasmids, we include a characterized promoter library
and test ribosome binding site design. Together,
these gene expression tools and a standardized
plasmid set can facilitate modularity and part exchange
to make Geobacillus a thermophile chassis for
synthetic biology.
gram-positive thermophile of industrial interest that
exhibits rapid growth and can utilize a variety of
plant-derived feedstocks. It is an attractive chassis
organism for high temperature biotechnology and
synthetic biology applications but is currently limited
by a lack of available genetic tools. Here we describe
a set of modular shuttle vectors, including a
promoter library and reporter proteins. The compact
plasmids are composed of interchangeable modules
for molecular cloning in Escherichia coli and stable
propagation in G. thermoglucosidasius and other
Geobacillus species. Modules include two origins of
replication, two selectable markers and three reporter
proteins for characterization of gene expression.
For fine-tuning heterologous expression from these
plasmids, we include a characterized promoter library
and test ribosome binding site design. Together,
these gene expression tools and a standardized
plasmid set can facilitate modularity and part exchange
to make Geobacillus a thermophile chassis for
synthetic biology.
Date Issued
2016-06-22
Date Acceptance
2016-06-22
Citation
ACS Synthetic Biology, 2016, 5 (12), pp.1342-1347
ISSN
2161-5063
Publisher
American Chemical Society
Start Page
1342
End Page
1347
Journal / Book Title
ACS Synthetic Biology
Volume
5
Issue
12
Copyright Statement
© 2016 American Chemical Society. This is an open access article published under a Creative Commons Attribution (CC-BY) License, which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
License URL
Sponsor
Engineering & Physical Science Research Council (EPSRC)
TMO Renewables Limited
Biotechnology and Biological Sciences Research Cou
Biotechnology and Biological Sciences Research Cou
Engineering & Physical Science Research Council (E
Grant Number
EP/G036004/1
NA
BB/J001120/1
BB/I00534X/1
EP/J02175X/1
Subjects
Science & Technology
Life Sciences & Biomedicine
Biochemical Research Methods
Biochemistry & Molecular Biology
thermophile
plasmid
Geobacillus
genetic tools
GREEN FLUORESCENT PROTEIN
SYNTHETIC BIOLOGY
ESCHERICHIA-COLI
BACILLUS-STEAROTHERMOPHILUS
NUCLEOTIDE-SEQUENCE
GENE-EXPRESSION
COPY NUMBER
TRANSFORMATION
THERMOGLUCOSIDASIUS
TEMPERATURES
Publication Status
Published