Serial clustering of late onset group B streptococcal infections in the neonatal unit - a genomic re-evaluation of causality
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Published version
Author(s)
Type
Journal Article
Abstract
Background. Invasive Group B streptococcus (GBS) is a major cause of serious neonatal infection. Current strategies to reduce early onset GBS disease have no impact on late onset disease (LOD). Although GBS is a normal part of the enteric microbiota in healthy term infants, LOD cases arising in the neonatal intensive care unit setting raise questions about mode of acquisition.
Methods. Enhanced surveillance for any case of late onset GBS sepsis admitted to a level 3, 24-bed neonatal intensive care unit over a 2 year period was instituted following a cluster of four cases. All late onset GBS isolates were serotyped and genomes sequenced. Rectal screening of neonates for GBS was undertaken weekly. Healthcare workers and parents were not screened.
Results. Over 24 months, a total of 12 late onset invasive GBS episodes were identified (incidence 0.6/1000 live births). Genomic analysis revealed that 11/12 GBS isolates (92%) were linked to at least one other LOD isolate. Four isolates from the first cluster were serotype V, resistant to macrolides and lincosamides, providing early evidence of a common source. Sequencing confirmed isolates were indistinguishable, or distinguishable by 1 SNP, from each other, and distinct from contemporary serotype V GBS. Although a common environmental source was not identified, prompt infection prevention interventions were instituted and no further serotype V GBS infections arose. Prospective surveillance identified three further clusters of LOD due to serotypes Ia, Ib, and III, leading to re-evaluation of interventions required for preventing GBS LOD.
Conclusion. Acquisition routes for LOD GBS in the neonatal unit are poorly understood; such cases may not necessarily be sporadic. Within this neonatal unit, our data suggest that a single case of LOD GBS sepsis should be considered a potential nosocomial transmission event warranting prompt investigation, heightened infection prevention vigilance and action where required.
Methods. Enhanced surveillance for any case of late onset GBS sepsis admitted to a level 3, 24-bed neonatal intensive care unit over a 2 year period was instituted following a cluster of four cases. All late onset GBS isolates were serotyped and genomes sequenced. Rectal screening of neonates for GBS was undertaken weekly. Healthcare workers and parents were not screened.
Results. Over 24 months, a total of 12 late onset invasive GBS episodes were identified (incidence 0.6/1000 live births). Genomic analysis revealed that 11/12 GBS isolates (92%) were linked to at least one other LOD isolate. Four isolates from the first cluster were serotype V, resistant to macrolides and lincosamides, providing early evidence of a common source. Sequencing confirmed isolates were indistinguishable, or distinguishable by 1 SNP, from each other, and distinct from contemporary serotype V GBS. Although a common environmental source was not identified, prompt infection prevention interventions were instituted and no further serotype V GBS infections arose. Prospective surveillance identified three further clusters of LOD due to serotypes Ia, Ib, and III, leading to re-evaluation of interventions required for preventing GBS LOD.
Conclusion. Acquisition routes for LOD GBS in the neonatal unit are poorly understood; such cases may not necessarily be sporadic. Within this neonatal unit, our data suggest that a single case of LOD GBS sepsis should be considered a potential nosocomial transmission event warranting prompt investigation, heightened infection prevention vigilance and action where required.
Date Issued
2018-09-15
Date Acceptance
2018-02-21
Citation
Clinical Infectious Diseases, 2018, 67 (6), pp.854-860
ISSN
1058-4838
Publisher
Oxford University Press (OUP)
Start Page
854
End Page
860
Journal / Book Title
Clinical Infectious Diseases
Volume
67
Issue
6
Copyright Statement
© The Author(s) 2018. Published by Oxford University Press for the Infectious Diseases Society of America. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
Sponsor
Wellcome Trust
Medical Research Council (MRC)
Medical Research Council (MRC)
National Institute for Health Research
National Institute for Health Research
Medical Research Council (MRC)
Rosetrees Trust
Identifier
https://academic.oup.com/cid/article/67/6/854/4917564
Grant Number
087732/Z/08/Z
G0800777
G0800777
HPRU-2012-10047
HPRU-2012-10047
MR/R015600/1
Subjects
Science & Technology
Life Sciences & Biomedicine
Immunology
Infectious Diseases
Microbiology
Streptococcus agalactiae
whole-genome sequencing
group B streptococcus
neonate
outbreak
INTENSIVE-CARE-UNIT
INVASIVE DISEASE
BREAST-MILK
TRANSMISSION
OUTBREAK
COLONIZATION
EPIDEMIOLOGY
ASSOCIATION
INFANTS
SEPSIS
Bacteremia
Cluster Analysis
Genomics
Humans
Incidence
Infant, Newborn
Intensive Care Units, Neonatal
Neonatal Screening
Phylogeny
Prospective Studies
Risk Factors
Serogroup
Streptococcal Infections
Streptococcus agalactiae
United Kingdom
Whole Genome Sequencing
Humans
Streptococcus agalactiae
Bacteremia
Streptococcal Infections
Neonatal Screening
Incidence
Cluster Analysis
Risk Factors
Prospective Studies
Genomics
Phylogeny
Infant, Newborn
Intensive Care Units, Neonatal
Serogroup
United Kingdom
Whole Genome Sequencing
Microbiology
06 Biological Sciences
11 Medical and Health Sciences
Publication Status
Published
Date Publish Online
2018-03-02