Nanozyme-catalysed CRISPR assay for preamplification-free detection of non-coding RNAs
File(s)2022-BrotoKaminski-NatNano-accepted.pdf (871.86 KB)
Accepted version
Author(s)
Type
Journal Article
Abstract
CRISPR-based diagnostics enable specific sensing of DNA and RNA biomarkers associated with
human diseases. This is achieved through the binding of guide RNAs to a complementary
sequence which activates Cas enzymes to cleave reporter molecules. Currently, most CRISPRbased diagnostics rely on target preamplification to reach sufficient sensitivity for clinical
applications. This limits quantification capability and adds complexity to the reaction chemistry.
Here, we show the combination of a CRISPR/Cas-based reaction with a Nanozyme-Linked
ImmunoSorbent Assay which allows for the quantitative and colorimetric readout of Cas13-
mediated RNA detection through catalytic metallic nanoparticles at room temperature
(CrisprZyme). We demonstrate CrisprZyme is easily adaptable to a lateral-flow-based readout
and different Cas enzymes, and enables the sensing of non-coding RNAs including microRNAs,
long non-coding RNAs and circular RNAs. We utilise this platform to identify patients with acute
myocardial infarction and to monitor cellular differentiation in vitro and in tissue biopsies from
prostate cancer patients. We anticipate that CrisprZyme has significant potential as a universally
applicable signal catalyst for CRISPR-based diagnostics which will expand the spectrum of
targets for preamplification-free, quantitative detection.
human diseases. This is achieved through the binding of guide RNAs to a complementary
sequence which activates Cas enzymes to cleave reporter molecules. Currently, most CRISPRbased diagnostics rely on target preamplification to reach sufficient sensitivity for clinical
applications. This limits quantification capability and adds complexity to the reaction chemistry.
Here, we show the combination of a CRISPR/Cas-based reaction with a Nanozyme-Linked
ImmunoSorbent Assay which allows for the quantitative and colorimetric readout of Cas13-
mediated RNA detection through catalytic metallic nanoparticles at room temperature
(CrisprZyme). We demonstrate CrisprZyme is easily adaptable to a lateral-flow-based readout
and different Cas enzymes, and enables the sensing of non-coding RNAs including microRNAs,
long non-coding RNAs and circular RNAs. We utilise this platform to identify patients with acute
myocardial infarction and to monitor cellular differentiation in vitro and in tissue biopsies from
prostate cancer patients. We anticipate that CrisprZyme has significant potential as a universally
applicable signal catalyst for CRISPR-based diagnostics which will expand the spectrum of
targets for preamplification-free, quantitative detection.
Date Issued
2022-10-01
Date Acceptance
2022-06-16
Citation
Nature Nanotechnology, 2022, 17, pp.1120-1126
ISSN
1748-3387
Publisher
Nature Research
Start Page
1120
End Page
1126
Journal / Book Title
Nature Nanotechnology
Volume
17
Copyright Statement
© 2022, The Author(s), under exclusive licence to Springer Nature Limited
Sponsor
British Heart Foundation
Engineering & Physical Science Research Council (E
Research Council of Norway
Engineering & Physical Science Research Council (E
Royal Academy Of Engineering
Grant Number
RE/18/4/34215
EP/K031953/1
'Ref: 512010/144566 - SFF-HTH
WT406114
CIET2021\94
Subjects
Science & Technology
Technology
Nanoscience & Nanotechnology
Materials Science, Multidisciplinary
Science & Technology - Other Topics
Materials Science
NUCLEIC-ACID DETECTION
AMPLIFICATION
Biomarkers
CRISPR-Cas Systems
DNA
Humans
Immunosorbents
MicroRNAs
RNA, Circular
Humans
MicroRNAs
DNA
Immunosorbents
CRISPR-Cas Systems
Biomarkers
RNA, Circular
Nanoscience & Nanotechnology
Publication Status
Published
Date Publish Online
2022-08-04