Spike rate estimation using Bayesian Adaptive Kernel Smoother (BAKS) and its application to brain machine interfaces
File(s)EMBC18_2289_FI.pdf (127.14 KB)
Accepted version
Author(s)
Ahmadi, Nur
Constandinou, TG
Bouganis, Christos
Type
Conference Paper
Abstract
Brain Machine Interfaces (BMIs) mostly utilise spike rate as an input feature for decoding a desired motor output as it conveys a useful measure to the underlying neuronal activity. The spike rate is typically estimated by a using non-overlap binning method that yields a coarse estimate. There exist several methods that can produce a smooth estimate which could potentially improve the decoding performance. However, these methods are relatively computationally heavy for real-time BMIs. To address this issue, we propose a new method for estimating spike rate that is able to yield a smooth estimate and also amenable to real-time BMIs. The proposed method, referred to as Bayesian adaptive kernel smoother (BAKS), employs kernel smoothing technique that considers the bandwidth as a random variable with prior distribution which is adaptively updated through a Bayesian framework. With appropriate selection of prior distribution and kernel function, an analytical expression can be achieved for the kernel bandwidth. We apply BAKS and evaluate its impact on of fline BMI decoding performance using Kalman filter. The results show that overlap BAKS improved the decoding performance up to 3.33% and 12.93% compared to overlap and non-overlap
binning methods, respectively, depending on the window size. This suggests the feasibility and the potential use of BAKS method for real-time BMIs.
binning methods, respectively, depending on the window size. This suggests the feasibility and the potential use of BAKS method for real-time BMIs.
Date Issued
2018-10-29
Date Acceptance
2018-04-07
Citation
2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2018
Publisher
IEEE
Journal / Book Title
2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)
Copyright Statement
© 2018 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
Sponsor
Engineering & Physical Science Research Council (EPSRC)
Grant Number
EP/M020975/1
Source
40th International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)
Subjects
Action Potentials
Algorithms
Bayes Theorem
Brain-Computer Interfaces
Neurons
Neurons
Bayes Theorem
Action Potentials
Algorithms
Brain-Computer Interfaces
Publication Status
Published
Start Date
2018-07-17
Finish Date
2018-07-21
Coverage Spatial
Honolulu, Hawaii