The interplay between feedback and buffering in homeostasis
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Supporting information
Supporting information
Author(s)
Hancock, E
Ang, J
Papachristodoulou, A
Stan, G
Type
Journal Article
Abstract
Feedback and buffering---the use of reservoirs of molecules to maintain molecular concentrations---are the primary mechanisms for robust regulation in biochemical processes. The universal principles behind their combined effect, however, have not been studied before. Here, we determine the fundamental forms of cooperation and tradeoff between buffering and feedback. We find that negative feedback regulates slow-changing components of time-varying signals, while buffering regulates fast-changing components, consistent with observations of both ATP and pH regulation. We further find that buffering stabilizes feedback and improves its effectiveness, but also introduces molecular noise. In addition, we show that rapid-acting buffering imparts negative derivative feedback, while slow-acting buffering can result in feedforward filtering of specific signals; both are control strategies widely used in technology. Finally, we discover an empirical cross-species relationship between feedback in glycolysis and ATP buffering that is consistent with our findings.
Date Issued
2017-11-22
Date Acceptance
2017-09-20
Citation
Cell Systems, 2017, 5 (5), pp.498-508.e23
ISSN
2405-4712
Publisher
Elsevier
Start Page
498
End Page
508.e23
Journal / Book Title
Cell Systems
Volume
5
Issue
5
Copyright Statement
© 2017 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
License URL
Sponsor
Engineering & Physical Science Research Council (EPSRC)
Engineering & Physical Science Research Council (EPSRC)
Engineering & Physical Science Research Council (EPSRC)
Grant Number
EP/M002187/1
EP/K020617/1
EP/I032223/1
Subjects
Science & Technology
Life Sciences & Biomedicine
Biochemistry & Molecular Biology
Cell Biology
ROBUST PERFECT ADAPTATION
GLYCOLYTIC OSCILLATIONS
INORGANIC POLYPHOSPHATE
MUSCLE
NOISE
DESIGN
PHOSPHOFRUCTOKINASE
VERTEBRATES
MODULATION
PHOSPHATE
ATP
Le Chatelier's principle
buffering
control theory
derivative control
feedback
glycolysis
homeostasis
phosphocreatine
systems biology
Adenosine Triphosphate
Animals
Buffers
Feedback
Homeostasis
Hydrogen-Ion Concentration
Mammals
Models, Biological
Animals
Mammals
Adenosine Triphosphate
Buffers
Homeostasis
Hydrogen-Ion Concentration
Models, Biological
Feedback
0601 Biochemistry and Cell Biology
Publication Status
Published
Date Publish Online
2017-10-18