A robust and automated algorithm that uses single-channel spike sorting to label multi-channel Neuropixels data
Author(s)
Zhang, Zheng
Constandinou, Timothy G
Type
Conference Paper
Abstract
This paper describes preliminary work towards an automated algorithm for labelling Neuropixel data that exploits the fact that adjacent recording sites are spatially oversampled. This is achieved by combining classical single channel spike sorting with spatial spike grouping, resulting in an improvement in both accuracy and robustness. This is additionally complemented by an automated method for channel selection that determines which channels contain high quality data. The algorithm has been applied to a freely accessible dataset, produced by Cortex Lab, UCL. This has been evaluated to have a accuracy of over 77% compared to a manually curated ground truth.
Date Issued
2021-05-06
Date Acceptance
2021-02-01
Citation
2021 10TH INTERNATIONAL IEEE/EMBS CONFERENCE ON NEURAL ENGINEERING (NER), 2021, pp.783-787
ISSN
1948-3546
Publisher
IEEE
Start Page
783
End Page
787
Journal / Book Title
2021 10TH INTERNATIONAL IEEE/EMBS CONFERENCE ON NEURAL ENGINEERING (NER)
Copyright Statement
© 2021 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000681358200154&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Source
10th International IEEE-EMBS Conference on Neural Engineering (NER)
Publication Status
Published
Start Date
2021-05-04
Finish Date
2021-05-06
Coverage Spatial
Prague, ELECTR NETWORK
Date Publish Online
2021-05-06