Development of polyamine substituted triphenylamine ligands with high affinity and selectivity for G-quadruplex DNA
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Accepted version
Supporting information
Author(s)
Type
Journal Article
Abstract
Currently significant efforts are devoted to designing small molecules able to bind selectively to guanine-quadruplexes (G4s). These non-canonical DNA structures are implicated in various important biological processes and have been identified as potential targets for drug development. Previously, we reported a series of triphenylamine(TPA)-based compounds including macrocyclic polyamines, which display high affinity towards G4 DNA. Following from this initial work, herein we present a series of second-generation compounds, in which the central TPA has been functionalised with flexible and adaptive linear polyamines, aiming to maximise the selectivity towards G4 DNA. The acid-base properties of the new derivatives have been studied by means of potentiometric titrations, UV-Vis and fluorescence emission spectroscopies. The interaction with G4s and duplex DNA has been explored using FRET melting assays, fluorescence spectroscopy and circular dichroism. Compared to our previously TPA derivatives with macrocyclic substituents, the new ligands reported herein retain the G4 affinity, but display two orders of magnitude higher selectivity for G4 vs. duplex DNA, most likely due to the ability of the linear substituents to embrace the G4 structure.
Date Issued
2020-04-17
Date Acceptance
2019-11-07
Citation
ChemBioChem: a European journal of chemical biology, 2020, 21 (8), pp.1167-1177
ISSN
1439-4227
Publisher
Wiley
Start Page
1167
End Page
1177
Journal / Book Title
ChemBioChem: a European journal of chemical biology
Volume
21
Issue
8
Copyright Statement
© 2019 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim. This is the peer reviewed version of the following article, which has been published in final form at https://onlinelibrary.wiley.com/doi/abs/10.1002/cbic.201900678. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions.
Identifier
https://www.ncbi.nlm.nih.gov/pubmed/31701633
Subjects
* G-quadruplex DNA * G4 selectivity * polyamine-based ligand *fluorescence
Publication Status
Published
Coverage Spatial
Germany
Date Publish Online
2019-11-08