The role of the RNA binding protein LARP-1 in the post-transcriptional regulation of cisplatin resistant ovarian cancer
File(s)
Author(s)
Stavraka, Chara
Type
Thesis
Abstract
Epithelial ovarian cancer (EOC) is the most lethal gynaecological malignancy accounting for over 4000 deaths annually in the UK. Due to the lack of a validated screening tool, patients usually present with advanced disease and develop resistance to platinum-based chemotherapy. Resensitising resistant tumour cells to cisplatin remains an unmet clinical need. The RNA-binding protein LARP1 is highly expressed in ovarian cancer and its depletion by RNA interference (RNAi) was found to restore platinum sensitivity in cisplatin-resistant EOC cell lines showing a synergistic anti-tumour effect with cisplatin.
Using immunoprecipitation followed by ultra-high-performance liquid chromatography tandem mass spectrometry (UHPLC-MS/MS) in cisplatin sensitive (OVCAR3) and resistant (OVCAR8) ovarian cancer cell lines before and after cisplatin treatment, I identified PABP1, and YB-1 as strong, RNA-dependent LARP1 interactors in both cell lines. Upon cisplatin treatment, the interaction of LARP1 with YB-1 was preserved only in the resistant cell line and was further investigated as both proteins are known for promoting cisplatin resistance. In untreated OVCAR8 and OVCAR3 cells, LARP1 and YB-1 are predominantly cytoplasmic but accumulate in the nucleus upon cisplatin-induced genotoxic stress.
LARP1 and YB-1 are both in complex with, and regulate the mRNA transcripts of genes linked to cisplatin resistance such as the efflux ATPase pump ATP7B, the DNA damage binding protein 2 (DDB2) and the pro-survival factor BCL2. Both LARP1 and YB-1 act on their targets by regulating their mRNA abundance with LARP1 showing a greater effect.
Using the Surface Sensing of Translation (SUnSET) method, LARP1 was found to play a fundamental role in maintaining protein synthesis during genotoxic stress.
I conclude that LARP1, via its RNA-mediated interaction with YB-1, is a key post-transcriptional regulator of genes involved in pre-and post-target mechanisms of cisplatin resistance. Furthermore, it plays a vital role in preserving “de novo” protein synthesis and consequently cell survival during cisplatin induced genotoxic stress. Its diverse and fundamental functions make it a promising therapeutic target.
Using immunoprecipitation followed by ultra-high-performance liquid chromatography tandem mass spectrometry (UHPLC-MS/MS) in cisplatin sensitive (OVCAR3) and resistant (OVCAR8) ovarian cancer cell lines before and after cisplatin treatment, I identified PABP1, and YB-1 as strong, RNA-dependent LARP1 interactors in both cell lines. Upon cisplatin treatment, the interaction of LARP1 with YB-1 was preserved only in the resistant cell line and was further investigated as both proteins are known for promoting cisplatin resistance. In untreated OVCAR8 and OVCAR3 cells, LARP1 and YB-1 are predominantly cytoplasmic but accumulate in the nucleus upon cisplatin-induced genotoxic stress.
LARP1 and YB-1 are both in complex with, and regulate the mRNA transcripts of genes linked to cisplatin resistance such as the efflux ATPase pump ATP7B, the DNA damage binding protein 2 (DDB2) and the pro-survival factor BCL2. Both LARP1 and YB-1 act on their targets by regulating their mRNA abundance with LARP1 showing a greater effect.
Using the Surface Sensing of Translation (SUnSET) method, LARP1 was found to play a fundamental role in maintaining protein synthesis during genotoxic stress.
I conclude that LARP1, via its RNA-mediated interaction with YB-1, is a key post-transcriptional regulator of genes involved in pre-and post-target mechanisms of cisplatin resistance. Furthermore, it plays a vital role in preserving “de novo” protein synthesis and consequently cell survival during cisplatin induced genotoxic stress. Its diverse and fundamental functions make it a promising therapeutic target.
Version
Open Access
Date Issued
2018-02
Date Awarded
2018-08
Advisor
Buluwela, Laki
Mura, Manuela
Ghaem-Maghami, Sadaf
Sponsor
Cancer Research UK
Publisher Department
Department of Surgery & Cancer
Publisher Institution
Imperial College London
Qualification Level
Doctoral
Qualification Name
Doctor of Philosophy (PhD)