Convolutional recurrent neural networks for dynamic MR image reconstruction
File(s)clean-copy-convolutional (2).pdf (2.95 MB)
Accepted version
Author(s)
Type
Journal Article
Abstract
Accelerating the data acquisition of dynamic magnetic resonance imaging (MRI) leads to a challenging ill-posed inverse problem, which has received great interest from both the signal processing and machine learning communities over the last decades. The key ingredient to the problem is how to exploit the temporal correlations of the MR sequence to resolve aliasing artefacts. Traditionally, such observation led to a formulation of an optimisation problem, which was solved using iterative algorithms. Recently, however, deep learning based-approaches have gained significant popularity due to their ability to solve general inverse problems. In this work, we propose a unique, novel convolutional recurrent neural network (CRNN) architecture which reconstructs high quality cardiac MR images from highly undersampled k-space data by jointly exploiting the dependencies of the temporal sequences as well as the iterative nature of the traditional optimisation algorithms. In particular, the proposed architecture embeds the structure of the traditional iterative algorithms, efficiently modelling the recurrence of the iterative reconstruction stages by using recurrent hidden connections over such iterations. In addition, spatio-temporal dependencies are simultaneously learnt by exploiting bidirectional recurrent hidden connections across time sequences. The proposed method is able to learn both the temporal dependency and the iterative reconstruction process effectively with only a very small number of parameters, while outperforming current MR reconstruction methods in terms of reconstruction accuracy and speed.
Date Issued
2019-01-01
Date Acceptance
2018-08-01
Citation
IEEE Transactions on Medical Imaging, 2019, 38 (1), pp.280-290
ISSN
0278-0062
Publisher
Institute of Electrical and Electronics Engineers
Start Page
280
End Page
290
Journal / Book Title
IEEE Transactions on Medical Imaging
Volume
38
Issue
1
Copyright Statement
© 2018 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
Sponsor
Engineering & Physical Science Research Council (EPSRC)
Identifier
https://www.ncbi.nlm.nih.gov/pubmed/30080145
Grant Number
EP/P001009/1
Subjects
Science & Technology
Technology
Life Sciences & Biomedicine
Computer Science, Interdisciplinary Applications
Engineering, Biomedical
Engineering, Electrical & Electronic
Imaging Science & Photographic Technology
Radiology, Nuclear Medicine & Medical Imaging
Computer Science
Engineering
Recurrent neural network
convolutional neural network
dynamic magnetic resonance imaging
cardiac image reconstruction
K-T BLAST
LOW-RANK
SENSE
SPARSITY
08 Information and Computing Sciences
09 Engineering
Nuclear Medicine & Medical Imaging
Publication Status
Published
Coverage Spatial
United States
Date Publish Online
2018-08-06