Multi-ancestry genome-wide association study of 520,000 subjects identifies 32 loci associated with stroke and stroke subtypes
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Accepted version
Accepted version
Author(s)
Malik, Rainer
Kooner, JS
Elliott, P
Chambers, John
Dichgans, Martin
Type
Journal Article
Abstract
Stroke has multiple etiologies, but the underlying genes and pathways are largely unknown. We conducted a multiancestry genome-wide-association meta-analysis in 521,612 individuals (67,162 cases and 454,450 controls) and discovered 22 new stroke risk loci, bringing the total to 32. We further found shared genetic variation with related vascular traits, including blood pressure, cardiac traits, and venous thromboembolism, at individual loci (n = 18), and using genetic risk scores and linkage-disequilibrium-score regression. Several loci exhibited distinct association and pleiotropy patterns for etiological stroke subtypes. Eleven new susceptibility loci indicate mechanisms not previously implicated in stroke pathophysiology, with prioritization of risk variants and genes accomplished through bioinformatics analyses using extensive functional datasets. Stroke risk loci were significantly enriched in drug targets for antithrombotic therapy.
Date Issued
2018-03-12
Date Acceptance
2018-01-08
Citation
Nature Genetics, 2018, 50, pp.524-537
ISSN
1061-4036
Publisher
Nature Publishing Group
Start Page
524
End Page
537
Journal / Book Title
Nature Genetics
Volume
50
Copyright Statement
© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
Subjects
Science & Technology
Life Sciences & Biomedicine
Genetics & Heredity
SMALL-VESSEL DISEASE
WHITE-MATTER HYPERINTENSITIES
CORONARY-ARTERY-DISEASE
HUMAN GENETIC-VARIATION
SUDDEN CARDIAC DEATH
ATRIAL-FIBRILLATION
ISCHEMIC-STROKE
COMPLEX TRAITS
SUSCEPTIBILITY LOCI
HEMORRHAGIC STROKE
AFGen Consortium
Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium
International Genomics of Blood Pressure (iGEN-BP) Consortium
INVENT Consortium
STARNET
BioBank Japan Cooperative Hospital Group
COMPASS Consortium
EPIC-CVD Consortium
EPIC-InterAct Consortium
International Stroke Genetics Consortium (ISGC)
METASTROKE Consortium
Neurology Working Group of the CHARGE Consortium
NINDS Stroke Genetics Network (SiGN)
UK Young Lacunar DNA Study
MEGASTROKE Consortium
MEGASTROKE Consortium:
11 Medical And Health Sciences
06 Biological Sciences
Developmental Biology
Publication Status
Published
Article Number
NG-A46103R1