Fused graphical lasso for brain networks with symmetries
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Published version
Author(s)
Ranciati, Saverio
Roverato, Alberto
Luati, Alessandra
Type
Journal Article
Abstract
Neuroimaging is the growing area of neuroscience devoted to produce data with the goal of capturing processes and dynamics of the human brain. We consider the problem of inferring the brain connectivity network from time-dependent functional magnetic resonance imaging (fMRI) scans. To this aim we propose the symmetric graphical lasso, a penalized likelihood method with a fused type penalty function that takes into explicit account the natural symmetrical structure of the brain. Symmetric graphical lasso allows one to learn simultaneously both the network structure and a set of symmetries across the two hemispheres. We implement an alternating directions method of multipliers algorithm to solve the corresponding convex optimization problem. Furthermore, we apply our methods to estimate the brain networks of two subjects, one healthy and one affected by mental disorder, and to compare them with respect to their symmetric structure. The method applies once the temporal dependence characterizing fMRI data have been accounted for and we compare the impact on the analysis of different detrending techniques on the estimated brain networks. Although we focus on brain networks, symmetric graphical lasso is a tool which can be more generally applied to learn multiple networks in a context of dependent samples.
Date Issued
2021-11
Date Acceptance
2021-05-13
Citation
Journal of the Royal Statistical Society Series C: Applied Statistics, 2021, 70 (5), pp.1299-1322
ISSN
0035-9254
Publisher
Royal Statistical Society
Start Page
1299
End Page
1322
Journal / Book Title
Journal of the Royal Statistical Society Series C: Applied Statistics
Volume
70
Issue
5
Copyright Statement
© 2021 The Royal Statistical Society and John Wiley & Sons Ltd
This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
License URL
Identifier
https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000672926100001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
ACTIVATION
ADMM algorithm
EDGE
FMRI
fMRI data
GAUSSIAN MODELS
graphical model with symmetries
INVERSE COVARIANCE ESTIMATION
Mathematics
PATH
Physical Sciences
Science & Technology
SELECTION
STATISTICAL-ANALYSIS
Statistics & Probability
time series
undirected graphical models
Publication Status
Published
Date Publish Online
2021-11-17