Understanding resource competition to achieve predictable synthetic gene expression in eukaryotes
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Accepted version
Author(s)
Type
Journal Article
Abstract
Synthetic gene expression in engineered cells typically depends on the host cell’s limited pool of intracellular resources, which can lead to resource competition between native and engineered functions and may cause unanticipated effects in the host and synthetic gene circuit. For example, competition for shared resources may lead to cellular overload affecting physiological functions (that is, cellular burden) and negatively affect synthetic construct performance to the point of unreliability. This fundamental problem has implications for the use of synthetic genetic constructs in cell engineering for foundational research, therapy and bioprocessing. Resource competition has mainly been investigated in model bacteria systems, but also considerably affects eukaryotic systems, including mammalian cells. In this Review, we discuss resource competition beyond bacteria, outlining how it can lead to gene expression coupling, gene expression and metabolic burden. We also examine ways to quantify cellular burden in mammalian cells, and investigate circuit-centric and host-centric mitigation strategies, highlighting important implications of resource competition for cell engineering in therapeutic and bioproduction applications as well as in fundamental biology studies.
Date Issued
2024-09
Date Acceptance
2024-05-21
Citation
Nature Reviews Bioengineering, 2024, 2
ISSN
2731-6092
Publisher
Nature Research
Journal / Book Title
Nature Reviews Bioengineering
Volume
2
Copyright Statement
Copyright © 2024 Springer Nature. This is the author’s accepted manuscript made available under a CC-BY licence in accordance with Imperial’s Research Publications Open Access policy (www.imperial.ac.uk/oa-policy)
License URL
Identifier
http://dx.doi.org/10.1038/s44222-024-00206-0
Publication Status
Published
Date Publish Online
2024-07-04