Classification of Pediatric Asthma: From Phenotype Discovery to Clinical Practice
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Published version
Author(s)
Oksel, Ceyda
Haider, Sadia
Fontanella, Sara
Frainay, Clement
Custovic, Adnan
Type
Journal Article
Abstract
Advances in big data analytics have created an opportunity for a step change in unraveling mechanisms underlying the development of complex diseases such as asthma, providing valuable insights that drive better diagnostic decision-making in clinical practice, and opening up paths to individualized treatment plans. However, translating findings from data-driven analyses into meaningful insights and actionable solutions requires approaches and tools which move beyond mining and patterning longitudinal data. The purpose of this review is to summarize recent advances in phenotyping of asthma, to discuss key hurdles currently hampering the translation of phenotypic variation into mechanistic insights and clinical setting, and to suggest potential solutions that may address these limitations and accelerate moving discoveries into practice. In order to advance the field of phenotypic discovery, greater focus should be placed on investigating the extent of within-phenotype variation. We advocate a more cautious modeling approach by “supervising” the findings to delineate more precisely the characteristics of the individual trajectories assigned to each phenotype. Furthermore, it is important to employ different methods within a study to compare the stability of derived phenotypes, and to assess the immutability of individual assignments to phenotypes. If we are to make a step change toward precision (stratified or personalized) medicine and capitalize on the available big data assets, we have to develop genuine cross-disciplinary collaborations, wherein data scientists who turn data into information using algorithms and machine learning, team up with medical professionals who provide deep insights on specific subjects from a clinical perspective.
Date Issued
2018-09-20
Date Acceptance
2018-08-29
Citation
FRONTIERS IN PEDIATRICS, 2018, 6
ISSN
2296-2360
Publisher
FRONTIERS MEDIA SA
Journal / Book Title
FRONTIERS IN PEDIATRICS
Volume
6
Copyright Statement
© 2018 Oksel, Haider, Fontanella, Frainay and Custovic. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY https://creativecommons.org/licenses/by/4.0/). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
Identifier
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000445112100001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202
Subjects
Science & Technology
Life Sciences & Biomedicine
Pediatrics
asthma
phenotypes
disease progression
machine learning
longitudinal data
big data
LATENT CLASS ANALYSIS
1ST 6 YEARS
CHILDHOOD ASTHMA
BIRTH COHORT
ATOPY PHENOTYPES
BIG DATA
INFLAMMATORY SUBTYPES
WHEEZING PHENOTYPES
CLUSTER-ANALYSIS
IGE RESPONSES
Publication Status
Published
Article Number
ARTN 258
Date Publish Online
2018-09-20