In situ generation of RNA complexes for synthetic molecular strand displacement circuits in autonomous systems
File(s)HHR paper SI Wooli Nano letter format.pdf (1.24 MB) Wooli HHR Nano letter template clearn.pdf (1.38 MB)
Supporting information
Accepted version
Author(s)
Ouldridge, Thomas
Stan, Guy-Bart
Bae, Wooli
Type
Journal Article
Abstract
Synthetic molecular circuits implementing DNA or RNA strand-displacement reactions can be used to build complex systems such as molecular computers and feedback control systems. Despite recent advances, application of nucleic acid-based circuits in vivo remains challenging due to a lack of efficient methods to produce their essential components, namely, multistranded complexes known as gates, in situ, i.e., in living cells or other autonomous systems. Here, we propose the use of naturally occurring self-cleaving ribozymes to cut a single-stranded RNA transcript into a gate complex of shorter strands, thereby opening new possibilities for the autonomous and continuous production of RNA strands in a stoichiometrically and structurally controlled way.
Date Acceptance
2020-11-20
Citation
Nano Letters: a journal dedicated to nanoscience and nanotechnology, 21 (1), pp.265-271
ISSN
1530-6984
Publisher
American Chemical Society
Start Page
265
End Page
271
Journal / Book Title
Nano Letters: a journal dedicated to nanoscience and nanotechnology
Volume
21
Issue
1
Copyright Statement
© 2020 American Chemical Society. This document is the Accepted Manuscript version of a Published Work that appeared in final form in Nano Letters, after peer review and technical editing by the publisher. To access the final edited and published work see https://doi.org/10.1021/acs.nanolett.0c03629
Sponsor
The Royal Society
Engineering & Physical Science Research Council (EPSRC)
Royal Academy Of Engineering
Grant Number
UF150067
EP/P02596X/1
CiET1819\5
Subjects
Nanoscience & Nanotechnology