DNA origami as seeds for promoting protein crystallization
File(s)Supporting Information-for review.docx (2.22 MB) Manuscript-for review.docx (5.67 MB)
Supporting information
Accepted version
Author(s)
Type
Journal Article
Abstract
This study reports the first experimental evidence of DNA origami as a seed resulting in the increase in probability of protein crystallization. Using the DNA origami constructed from long single-stranded M13 DNA scaffolds folded with short single-stranded DNA staples, it was found that the addition of the DNA origami in concentrations of 2–6 nM to mixtures of a well-characterized protein (catalase) solution (1.0–7.0 mg/mL) resulted in a higher proportion of mixtures with successful crystallization, up to 11× greater. The improvement in crystallization is evident particularly for mixtures with low concentrations of catalase (<5 mg/mL). DNA origami in different conformations of a flat rectangular sheet and a tubular hollow cylinder were examined. Both conformations improved the crystallization as compared to control experiments without M13 DNA or nonfolded M13 DNA but exhibited little difference in the extent of protein crystallization improvement. This work confirms the predictions of the potential use of DNA origami to promote protein crystallization, with potential application to systems with limited protein availability or difficulty in crystallization.
Date Issued
2018-12-26
Date Acceptance
2018-11-28
Citation
ACS Applied Materials and Interfaces, 2018, 10 (51), pp.44240-44246
ISSN
1944-8244
Publisher
American Chemical Society
Start Page
44240
End Page
44246
Journal / Book Title
ACS Applied Materials and Interfaces
Volume
10
Issue
51
Copyright Statement
© 2018 American Chemical Society. This document is the Accepted Manuscript version of a Published Work that appeared in final form in ACS Applied Materials and Interfaces, after peer review and technical editing by the publisher. To access the final edited and published work see https://dx.doi.org/10.1021/acsami.8b15629
Sponsor
Engineering & Physical Science Research Council (EPSRC)
Identifier
https://pubs.acs.org/doi/10.1021/acsami.8b15629
Grant Number
EP/N015916/1
Subjects
Science & Technology
Technology
Nanoscience & Nanotechnology
Materials Science, Multidisciplinary
Science & Technology - Other Topics
Materials Science
DNA nanotechnology
DNA origami
DNA nanostructure
protein crystallization
DNA-protein interaction
NUCLEATION
CRYSTALS
NANOSTRUCTURES
KINETICS
DESIGN
ARRAYS
YIELD
DNA nanostructure
DNA nanotechnology
DNA origami
DNA−protein interaction
protein crystallization
Bacteriophage M13
Catalase
Crystallization
DNA, Fungal
DNA, Single-Stranded
Nanostructures
Nucleic Acid Conformation
Bacteriophage M13
Catalase
DNA, Fungal
DNA, Single-Stranded
Crystallization
Nucleic Acid Conformation
Nanostructures
03 Chemical Sciences
09 Engineering
Nanoscience & Nanotechnology
Publication Status
Published
Date Publish Online
2018-11-28